Gene: Sopen03g007790
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen03g007790
- Transcript Identifier Sopen03g007790.1
- Gene Type Coding gene
- Location Spenn-ch03 : 7381250-7384370 : positive
Gene Family Information
- ID HOM05D003401
- #Genes/#Species 201/91
- Phylogenetic origin
- ID ORTHO05D003906
- #Genes/#Species 199/91
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen03g007790.1
Descriptions
- Description glycosyl hydrolase family protein 43 | FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds | INVOLVED IN: carbohydrate metabolic process | LOCATED IN: cellular_component unknown | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 12 growth stages | CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 43 | BEST Arabidopsis thaliana protein match is: Arabinanase/levansucrase/invertase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005975 | IEA | InterPro | carbohydrate metabolic process | |
| GO:0010406 | ISO | PLAZA Integrative Orthology | classical arabinogalactan protein metabolic process | AT5G67540 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004553 | IEA | InterPro | hydrolase activity, hydrolyzing O-glycosyl compounds | |
| GO:0004565 | ISO | PLAZA Integrative Orthology | beta-galactosidase activity | AT5G67540 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005794 | ISO | PLAZA Integrative Orthology | Golgi apparatus | AT5G67540 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 21.2.5.2.1 | Cell wall organisation.hemicellulose.arabinogalactan.modification.beta-1,3-galactosidase (GH43) |