Gene: AT5G67540

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G67540
  • Transcript Identifier AT5G67540.2
  • Gene Type Coding gene
  • Location Chr5 : 26944253-26945757 : negative

Gene Family Information

  • ID HOM05D003401
  • #Genes/#Species 201/91
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G67540.2
  • uniprot Q8W1E6

Descriptions

  • Description Arabinanase/levansucrase/invertase
  • Computational description Arabinanase/levansucrase/invertase; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 43 (InterPro:IPR006710); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family protein 43 (TAIR:AT3G49880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
  • Computational description Arabinanase/levansucrase/invertase; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 43 (InterPro:IPR006710); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family protein 43 (TAIR:AT3G49880.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005975
IEA
Gene Ontologycarbohydrate metabolic process
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0010406
IMP
Gene Ontologyclassical arabinogalactan protein metabolic process1
GO:0008152
IEA
GOA Databasemetabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004553
IEA
Gene Ontologyhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004553
IEA
InterProhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004565
IDA
Gene Ontologybeta-galactosidase activity1
GO:0016798
IEA
GOA Databasehydrolase activity, acting on glycosyl bonds
GO:0016787
IEA
GOA Databasehydrolase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0005794
IDA, HDA
Gene OntologyGolgi apparatus1 2
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily
IPR006710 Glycoside hydrolase, family 43
Mapman id Description
21.2.5.2.1 Cell wall organisation.hemicellulose.arabinogalactan.modification.beta-1,3-galactosidase (GH43)