Gene: Sopen02g039120

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g039120
  • Transcript Identifier Sopen02g039120.1
  • Gene Type Coding gene
  • Location Spenn-ch02 : 59439560-59441403 : positive

Gene Family Information

  • ID HOM05D001107
  • #Genes/#Species 553/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g039120.1

Descriptions

  • Description Transcriptional factor with high similarity to the B3 region of the VP1/ABI3-like proteins. Full length FUS3 protein binds to the highly conserved RY motif (DNA motif CATGCA(TG)), present in many seed-specific promoters, and the B3 domains of this transcription factor is necessary for the specific interaction with the RY element. Transcriptional activity of FUS3 requires the B3 DNA-binding domain and an activation domain. FUS3 specifies cotyledon identity. Regulator of gene expression during late embryogenesis. Involved in the control foliar organ identity in Arabidopsis by regulating the synthesis of two hormones, abscisic acid and gibberellin. FUS3 together with LEC1 positively regulate the abundance of the ABI3 protein in the seed. | FUSCA 3 (FUS3) | CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 | BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated Os08g0101000
GO:0010228
ISO
PLAZA Integrative Orthologyvegetative to reproductive phase transition of meristem AT3G26790
GO:0010116
ISO
PLAZA Integrative Orthologypositive regulation of abscisic acid biosynthetic process AT3G26790
GO:0099402
ISO
PLAZA Integrative Orthologyplant organ development AT3G26790
GO:0048573
ISO
PLAZA Integrative Orthologyphotoperiodism, flowering Os01g0713600
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin AT3G26790
GO:0009789
ISO
PLAZA Integrative Orthologypositive regulation of abscisic acid-activated signaling pathway AT3G26790
GO:0045995
ISO
PLAZA Integrative Orthologyregulation of embryonic development AT3G26790
GO:0008284
ISO
PLAZA Integrative Orthologypositive regulation of cell population proliferation AT3G26790
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT3G26790
GO:0010373
ISO
PLAZA Integrative Orthologynegative regulation of gibberellin biosynthetic process AT3G26790
GO:0010262
ISO
PLAZA Integrative Orthologysomatic embryogenesis AT3G26790

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019900
ISO
PLAZA Integrative Orthologykinase binding AT3G26790
GO:0003677
IEA
InterProDNA binding
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding Os08g0101000
GO:0008270
ISO
PLAZA Homology (enrichment)zinc ion binding HOM05D001107
GO:0003700
IEA
InterProDNA-binding transcription factor activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus Os08g0101000

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003340 B3 DNA binding domain
IPR015300 DNA-binding pseudobarrel domain superfamily
IPR044800 B3 domain-containing transcription factor LEC2-like
Mapman id Description
15.5.5.5 RNA biosynthesis.transcriptional regulation.B3 transcription factor superfamily.transcription factor (LAV-ABI3)