Gene: Sopen02g038830

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g038830
  • Transcript Identifier Sopen02g038830.1
  • Gene Type Coding gene
  • Location Spenn-ch02 : 59258090-59262870 : positive

Gene Family Information

  • ID HOM05D001745
  • #Genes/#Species 371/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g038830.1

Descriptions

  • Description Encodes an ortholog of yeast NTF2, a nuclear envelop transport protein that functions as the nuclear import receptor for RanGDP, an essential player in nucleocytoplasmic transport. | nuclear transport factor 2B (NTF2B) | FUNCTIONS IN: protein transporter activity, Ran GTPase binding | INVOLVED IN: nucleocytoplasmic transport, protein import into nucleus | LOCATED IN: nuclear envelope, intracellular, nucleus, plasma membrane | EXPRESSED IN: 26 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 , Nuclear transport factor 2, Eukaryote | BEST Arabidopsis thaliana protein match is: nuclear transport factor 2A
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006913
ISO
PLAZA Integrative Orthologynucleocytoplasmic transport AT1G27970
GO:0006606
ISO
PLAZA Integrative Orthologyprotein import into nucleus AT1G27970

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G27970
GO:0031267
ISO
PLAZA Integrative Orthologysmall GTPase binding AT1G27970

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005635
ISO
PLAZA Integrative Orthologynuclear envelope AT1G27970
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G27970
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G27970
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT1G27970

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002075 Nuclear transport factor 2
IPR018222 Nuclear transport factor 2, eukaryote
IPR032710 NTF2-like domain superfamily
Mapman id Description
23.5.1.6 Protein translocation.nucleus.nucleocytoplasmic transport.RanGDP-specific nuclear import factor (NTF2)