Gene: AT1G27970

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G27970
  • Transcript Identifier AT1G27970.2
  • Gene Type Coding gene
  • Location Chr1 : 9746921-9748306 : positive

Gene Family Information

  • ID HOM05D001745
  • #Genes/#Species 371/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G27970.2
  • symbol NTF2B
  • uniprot Q9C7F5

Descriptions

  • Description nuclear transport factor 2B
  • Computational description nuclear transport factor 2B (NTF2B); FUNCTIONS IN: protein transporter activity, Ran GTPase binding; INVOLVED IN: nucleocytoplasmic transport, protein import into nucleus; LOCATED IN: nuclear envelope, intracellular, nucleus, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075), Nuclear transport factor 2, Eukaryote (InterPro:IPR018222); BEST Arabidopsis thaliana protein match is: nuclear transport factor 2A (TAIR:AT1G27310.1); Has 1018 Blast hits to 1018 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 491; Fungi - 232; Plants - 204; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink).
  • Computational description nuclear transport factor 2B (NTF2B); FUNCTIONS IN: protein transporter activity, Ran GTPase binding; INVOLVED IN: nucleocytoplasmic transport, protein import into nucleus; LOCATED IN: nuclear envelope, intracellular, nucleus, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear transport factor 2 (InterPro:IPR002075), Nuclear transport factor 2, Eukaryote (InterPro:IPR018222); BEST Arabidopsis thaliana protein match is: nuclear transport factor 2A (TAIR:AT1G27310.1); Has 947 Blast hits to 947 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 435; Fungi - 217; Plants - 201; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015031
IEA
GOA Databaseprotein transport
GO:0006913
IGI
IBA
Gene Ontologynucleocytoplasmic transport1 2
GO:0006606
IDA, IGI
Gene Ontologyprotein import into nucleus1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031267
IPI, IGI
Gene Ontologysmall GTPase binding1
GO:0005515
IPI
Gene Ontologyprotein binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA, HDA
Gene Ontologynucleus1 3
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IDA
ISM
Gene Ontologycytoplasm1
GO:0005635
IEA
GOA Databasenuclear envelope
GO:0005635
IDA
Gene Ontologynuclear envelope1
GO:0044613
IBA
Gene Ontologynuclear pore central transport channel2
GO:0005829
HDA
Gene Ontologycytosol4
GO:0005886
HDA
Gene Ontologyplasma membrane5
GO:0005730
IDA
Gene Ontologynucleolus1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR018222 Nuclear transport factor 2, eukaryote
IPR032710 NTF2-like domain superfamily
IPR002075 Nuclear transport factor 2
Mapman id Description
23.5.1.6 Protein translocation.nucleus.nucleocytoplasmic transport.RanGDP-specific nuclear import factor (NTF2)