Gene: Sopen02g036290
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen02g036290
- Transcript Identifier Sopen02g036290.1
- Gene Type Coding gene
- Location Spenn-ch02 : 57263844-57267731 : negative
Gene Family Information
- ID HOM05D000446
- #Genes/#Species 1165/97
- Phylogenetic origin
- ID ORTHO05D000321
- #Genes/#Species 1120/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen02g036290.1
Descriptions
- Description Glycosyl hydrolase family protein | FUNCTIONS IN: xylan 1,4-beta-xylosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds | INVOLVED IN: carbohydrate metabolic process | LOCATED IN: plasma membrane, vacuole | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal , Glycoside hydrolase, family 3, C-terminal , Glycoside hydrolase, catalytic core | BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005975 | IEA | InterPro | carbohydrate metabolic process | |
| GO:0045493 | IEA | InterPro | xylan catabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004553 | IEA | InterPro | hydrolase activity, hydrolyzing O-glycosyl compounds | |
| GO:0009044 | IEA | InterPro | xylan 1,4-beta-xylosidase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005774 | ISO | PLAZA Integrative Orthology | vacuolar membrane | AT5G10560 |
| GO:0005773 | ISO | PLAZA Integrative Orthology | vacuole | AT5G10560 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036881 | Glycoside hydrolase family 3 C-terminal domain superfamily |
| IPR017853 | Glycoside hydrolase superfamily |
| IPR026891 | Fibronectin type III-like domain |
| IPR044993 | Beta-D-xylosidase |
| IPR002772 | Glycoside hydrolase family 3 C-terminal domain |
| IPR013783 | Immunoglobulin-like fold |
| IPR001764 | Glycoside hydrolase, family 3, N-terminal |
| IPR036962 | Glycoside hydrolase, family 3, N-terminal domain superfamily |
| Mapman id | Description |
|---|---|
| 21.3.2.2.4.2 | Cell wall organisation.pectin.rhamnogalacturonan I.modification and degradation.alpha-L-arabinofuranosidase activities.bifunctional alpha-L-arabinofuranosidase and beta-D-xylosidase (BXL) |