Gene: Sopen02g033340

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g033340
  • Transcript Identifier Sopen02g033340.1
  • Gene Type Coding gene
  • Location Spenn-ch02 : 54829513-54836175 : negative

Gene Family Information

  • ID HOM05D000422
  • #Genes/#Species 1214/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g033340.1

Descriptions

  • Description Encodes a chloroplast-targeted Hsp101 homologue. Functions as a molecular chaperone involved in plastid differentiation mediating internal thylakoid membrane formation and conferring thermotolerance to chloroplasts during heat stress. APG6 is constitutively expressed in the root tips, the organ boundary region, the reproductive tissues of mature plants where plastids exist as proplastids, and slightly in the stems and leaves. APG6 expression is upregulated in response to heat shock in various organs, but not in response to other abiotic stresses. Apg6 mutants have a pale-green phenotype. | casein lytic proteinase B3 (CLPB3) | FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding | INVOLVED IN: chloroplast organization, response to heat | LOCATED IN: plastid stroma, chloroplast, chloroplast stroma | EXPRESSED IN: 28 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal , ATPase, AAA type, core , ATPase, AAA-2 , ATPase, AAA-type, core , Chaperonin clpA/B , Chaperonin ClpB , Chaperonin ClpA/B, conserved site , Clp, N-terminal | BEST Arabidopsis thaliana protein match is: casein lytic proteinase B4
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009408
IEA
InterProresponse to heat
GO:0042026
IEA
InterProprotein refolding
GO:0009658
ISO
PLAZA Integrative Orthologychloroplast organization AT5G15450

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
InterProATP binding
GO:0016887
IEA
InterProATP hydrolysis activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
InterProcytoplasm
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT5G15450
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G15450
GO:0009532
ISO
PLAZA Integrative Orthologyplastid stroma AT5G15450

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003593 AAA+ ATPase domain
IPR017730 Chaperonin ClpB
IPR019489 Clp ATPase, C-terminal
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR003959 ATPase, AAA-type, core
IPR001270 ClpA/B family
IPR036628 Clp, N-terminal domain superfamily
IPR041546 ClpA/ClpB, AAA lid domain
IPR004176 Clp, repeat (R) domain
Mapman id Description
26.4.2.4 External stimuli response.temperature.heat response.organellar chaperone (Clp-p/Clp-m)