Gene: Sopen02g031260

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g031260
  • Transcript Identifier Sopen02g031260.1
  • Gene Type Coding gene
  • Location Spenn-ch02 : 53312343-53315238 : negative

Gene Family Information

  • ID HOM05D000527
  • #Genes/#Species 1034/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g031260.1

Descriptions

  • Description Raffinose synthase, Encodes a protein which might be involved in the formation of verbascose. A T-DNA insertion mutant was shown to have a decreased amount of verbascose (as well as mannitol) whereas the levels of raffinose and stachyose remained unchanged. | seed imbibition 1-like (SIP1) | FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, galactinol-sucrose galactosyltransferase activity | INVOLVED IN: mannitol biosynthetic process, raffinose family oligosaccharide biosynthetic process, response to water deprivation, sucrose biosynthetic process | LOCATED IN: chloroplast | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core , Raffinose synthase | BEST Arabidopsis thaliana protein match is: Raffinose synthase family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005986
ISO
PLAZA Integrative Orthologysucrose biosynthetic process AT5G40390
GO:0006979
ISO
PLAZA Integrative Orthologyresponse to oxidative stress AT5G40390
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT5G40390
GO:0019593
ISO
PLAZA Integrative Orthologymannitol biosynthetic process AT5G40390
GO:0010325
ISO
PLAZA Integrative Orthologyraffinose family oligosaccharide biosynthetic process AT5G40390
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT5G40390

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
InterProcatalytic activity
GO:0047274
ISO
PLAZA Integrative Orthologygalactinol-sucrose galactosyltransferase activity Os01g0170000

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G40390

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013785 Aldolase-type TIM barrel
IPR017853 Glycoside hydrolase superfamily
IPR008811 Glycosyl hydrolases 36
Mapman id Description
3.4.2 Carbohydrate metabolism.oligosaccharide metabolism.raffinose synthase