Gene: Sopen02g030630

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g030630
  • Transcript Identifier Sopen02g030630.1
  • Gene Type Coding gene
  • Location Spenn-ch02 : 52714071-52714792 : positive

Gene Family Information

  • ID HOM05D001330
  • #Genes/#Species 472/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g030630.1

Descriptions

  • Description Ribulose bisphosphate carboxylase small chain 2B, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2B) - Solanum tuberosum (Potato), Ribulose bisphosphate carboxylase (small chain) family protein | FUNCTIONS IN: ribulose-bisphosphate carboxylase activity | INVOLVED IN: carbon fixation, response to blue light, response to red light, response to far red light | LOCATED IN: thylakoid, chloroplast ribulose bisphosphate carboxylase complex, apoplast, chloroplast, membrane | EXPRESSED IN: 12 plant structures | CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, small chain | BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase (small chain) family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT1G67090
GO:0110102
ISO
PLAZA Integrative Orthologyribulose bisphosphate carboxylase complex assembly AT5G38410
GO:0015979
ISO
PLAZA Integrative Orthologyphotosynthesis AT5G38410

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019904
ISO
PLAZA Integrative Orthologyprotein domain specific binding AT5G38430
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G38410
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G38430

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT5G38430
GO:0022626
ISO
PLAZA Integrative Orthologycytosolic ribosome AT5G38420
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT5G38430
GO:0009579
ISO
PLAZA Integrative Orthologythylakoid AT5G38430
GO:0009535
ISO
PLAZA Integrative Orthologychloroplast thylakoid membrane AT1G67090
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G38430
GO:0031977
ISO
PLAZA Integrative Orthologythylakoid lumen AT1G67090
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast AT5G38430

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036385 Ribulose bisphosphate carboxylase, small subunit superfamily
IPR000894 Ribulose bisphosphate carboxylase small subunit, domain
IPR024680 Ribulose-1,5-bisphosphate carboxylase small subunit, N-terminal
IPR024681 Ribulose bisphosphate carboxylase, small subunit
Mapman id Description
1.2.1.1.2 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.RuBisCo heterodimer.small subunit