Gene: Sopen02g030640
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen02g030640
- Transcript Identifier Sopen02g030640.2
- Gene Type Coding gene
- Location Spenn-ch02 : 52716545-52735911 : positive
Gene Family Information
- ID HOM05D000002
- #Genes/#Species 26594/98
- Phylogenetic origin
- ID ORTHO05D000001
- #Genes/#Species 28434/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen02g030640.2
Descriptions
- Description Ribulose bisphosphate carboxylase small chain 2C, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2C) - Solanum tuberosum (Potato), Ribulose bisphosphate carboxylase (small chain) family protein | FUNCTIONS IN: ribulose-bisphosphate carboxylase activity | INVOLVED IN: carbon fixation, response to blue light, response to red light, response to far red light | LOCATED IN: thylakoid, chloroplast ribulose bisphosphate carboxylase complex, apoplast, chloroplast, membrane | EXPRESSED IN: 12 plant structures | CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, small chain | BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase (small chain) family protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0008270 | IEA | InterPro | zinc ion binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036385 | Ribulose bisphosphate carboxylase, small subunit superfamily |
| IPR036875 | Zinc finger, CCHC-type superfamily |
| IPR001878 | Zinc finger, CCHC-type |
| IPR024681 | Ribulose bisphosphate carboxylase, small subunit |
| IPR000894 | Ribulose bisphosphate carboxylase small subunit, domain |
| IPR024680 | Ribulose-1,5-bisphosphate carboxylase small subunit, N-terminal |
| Mapman id | Description |
|---|---|
| 1.2.1.1.2 | Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.RuBisCo heterodimer.small subunit |