Gene: Sopen02g028950

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g028950
  • Transcript Identifier Sopen02g028950.1
  • Gene Type Coding gene
  • Location Spenn-ch02 : 51387008-51388090 : positive

Gene Family Information

  • ID HOM05D003367
  • #Genes/#Species 203/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g028950.1

Descriptions

  • Description GDP-D-mannose 4,6-dehydratase | GDP-D-mannose 4,6-dehydratase 1 (GMD1) | FUNCTIONS IN: protein binding, GDP-mannose 4,6-dehydratase activity | INVOLVED IN: cellular metabolic process, GDP-mannose metabolic process, nucleotide-sugar metabolic process, metabolic process | LOCATED IN: intracellular | EXPRESSED IN: inflorescence meristem, root, flower | EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage | CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase , NAD(P)-binding domain , GDP-mannose 4,6-dehydratase | BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019673
IEA
InterProGDP-mannose metabolic process
GO:0009826
ISO
PLAZA Integrative Orthologyunidimensional cell growth AT3G51160
GO:0042351
ISO
PLAZA Integrative Orthology'de novo' GDP-L-fucose biosynthetic process AT3G51160

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008446
IEA
InterProGDP-mannose 4,6-dehydratase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G66280

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G51160

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036291 NAD(P)-binding domain superfamily
IPR006368 GDP-mannose 4,6-dehydratase
IPR016040 NAD(P)-binding domain
Mapman id Description
3.13.2.1.1 Carbohydrate metabolism.nucleotide sugar biosynthesis.GDP-L-fucose biosynthesis.de novo biosynthesis.GDP-D-mannose 4,6-dehydratase (MUR1)