Gene: Sopen02g025890

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g025890
  • Transcript Identifier Sopen02g025890.1
  • Gene Type Coding gene
  • Location Spenn-ch02 : 48985954-48992220 : positive

Gene Family Information

  • ID HOM05D000189
  • #Genes/#Species 2040/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g025890.1

Descriptions

  • Description Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain | FUNCTIONS IN: zinc ion binding | LOCATED IN: plasma membrane, vacuole | EXPRESSED IN: 11 plant structures | EXPRESSED DURING: 6 growth stages | CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation, RCC1 , Disease resistance/zinc finger/chromosome condensation-like region , Pleckstrin homology , Zinc finger, FYVE-type , Regulator of chromosome condensation/beta-lactamase-inhibitor protein II , Zinc finger, FYVE-related , Pleckstrin homology-type , Zinc finger, FYVE/PHD-type | BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
InterPrometal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT1G65920
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G65920

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II
IPR027988 Transcription factor BREVIS RADIX, N-terminal domain
IPR000306 FYVE zinc finger
IPR013591 Brevis radix (BRX) domain
IPR011993 PH-like domain superfamily
IPR011011 Zinc finger, FYVE/PHD-type
IPR000408 Regulator of chromosome condensation, RCC1
Mapman id Description
35.1 not assigned.annotated