Gene: AT1G65920

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G65920
  • Transcript Identifier AT1G65920.1
  • Gene Type Coding gene
  • Location Chr1 : 24525267-24529204 : negative

Gene Family Information

  • ID HOM05D000189
  • #Genes/#Species 2040/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G65920.1
  • uniprot Q9SRZ7

Descriptions

  • Description Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein
  • Computational description Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain; FUNCTIONS IN: zinc ion binding; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation, RCC1 (InterPro:IPR000408), Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591), Pleckstrin homology (InterPro:IPR001849), Zinc finger, FYVE-type (InterPro:IPR000306), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Zinc finger, FYVE-related (InterPro:IPR017455), Pleckstrin homology-type (InterPro:IPR011993), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain (TAIR:AT5G42140.1); Has 20784 Blast hits to 8293 proteins in 486 species: Archae - 65; Bacteria - 2335; Metazoa - 8187; Fungi - 1149; Plants - 2727; Viruses - 3; Other Eukaryotes - 6318 (source: NCBI BLink).
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0046872
IEA
InterPrometal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005794
ISM
Gene OntologyGolgi apparatus
GO:0005773
IDA
GOA Databasevacuole
GO:0005773
HDA
Gene Ontologyvacuole1
GO:0005886
IDA
GOA Databaseplasma membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011993 PH-like domain superfamily
IPR000306 FYVE zinc finger
IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II
IPR027988 Transcription factor BREVIS RADIX, N-terminal domain
IPR001849 Pleckstrin homology domain
IPR000408 Regulator of chromosome condensation, RCC1
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR013591 Brevis radix (BRX) domain
IPR011011 Zinc finger, FYVE/PHD-type
Mapman id Description
35.1 not assigned.annotated