Gene: Sopen02g024250
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen02g024250
- Transcript Identifier Sopen02g024250.1
- Gene Type Coding gene
- Location Spenn-ch02 : 47613536-47621155 : positive
Gene Family Information
- ID HOM05D000002
- #Genes/#Species 26594/98
- Phylogenetic origin
- ID ORTHO05D000001
- #Genes/#Species 28434/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen02g024250.1
Descriptions
- Description Retrovirus-related Pol polyprotein from transposon TNT 1-94 | Reverse transcriptase (EC 2.7.7.49) | Endonuclease) - Nicotiana tabacum (Common tobacco), FAD-binding Berberine family protein | FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity | INVOLVED IN: oxidation reduction | LOCATED IN: endomembrane system | CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 , Oxygen oxidoreductase covalent FAD-binding site , Berberine/berberine-like , FAD linked oxidase, N-terminal | BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0016491 | IEA | InterPro | oxidoreductase activity | |
GO:0050660 | IEA | InterPro | flavin adenine dinucleotide binding | |
GO:0003676 | IEA | InterPro | nucleic acid binding |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR013103 | Reverse transcriptase, RNA-dependent DNA polymerase |
IPR006094 | FAD linked oxidase, N-terminal |
IPR043502 | DNA/RNA polymerase superfamily |
IPR016167 | FAD-binding, type PCMH, subdomain 1 |
IPR036318 | FAD-binding, type PCMH-like superfamily |
IPR016169 | FAD-binding, type PCMH, subdomain 2 |
IPR012337 | Ribonuclease H-like superfamily |
IPR036397 | Ribonuclease H superfamily |
Mapman id | Description |
---|---|
50.1.1 | Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor |