Gene: Sopen02g024250

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g024250
  • Transcript Identifier Sopen02g024250.1
  • Gene Type Coding gene
  • Location Spenn-ch02 : 47613536-47621155 : positive

Gene Family Information

  • ID HOM05D000002
  • #Genes/#Species 26594/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g024250.1

Descriptions

  • Description Retrovirus-related Pol polyprotein from transposon TNT 1-94 | Reverse transcriptase (EC 2.7.7.49) | Endonuclease) - Nicotiana tabacum (Common tobacco), FAD-binding Berberine family protein | FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity | INVOLVED IN: oxidation reduction | LOCATED IN: endomembrane system | CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 , Oxygen oxidoreductase covalent FAD-binding site , Berberine/berberine-like , FAD linked oxidase, N-terminal | BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016491
IEA
InterProoxidoreductase activity
GO:0050660
IEA
InterProflavin adenine dinucleotide binding
GO:0003676
IEA
InterPronucleic acid binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013103 Reverse transcriptase, RNA-dependent DNA polymerase
IPR006094 FAD linked oxidase, N-terminal
IPR043502 DNA/RNA polymerase superfamily
IPR016167 FAD-binding, type PCMH, subdomain 1
IPR036318 FAD-binding, type PCMH-like superfamily
IPR016169 FAD-binding, type PCMH, subdomain 2
IPR012337 Ribonuclease H-like superfamily
IPR036397 Ribonuclease H superfamily
Mapman id Description
50.1.1 Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor