Gene: Sopen02g023650

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g023650
  • Transcript Identifier Sopen02g023650.1
  • Gene Type Coding gene
  • Location Spenn-ch02 : 47096519-47099364 : positive

Gene Family Information

  • ID HOM05D004841
  • #Genes/#Species 152/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g023650.1

Descriptions

  • Description This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase | Transducin/WD40 repeat-like superfamily protein | FUNCTIONS IN: protein binding, nucleotide binding | LOCATED IN: nucleolus, CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex | EXPRESSED IN: cultured cell | CONTAINS InterPro DOMAIN/s: WD40 repeat 2 , WD40 repeat-like-containing domain , WD40 repeat, conserved site , WD40-repeat-containing domain , WD40/YVTN repeat-like-containing domain , WD40 repeat , WD40 repeat, subgroup
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT1G65030
GO:0080008
ISO
PLAZA Integrative OrthologyCul4-RING E3 ubiquitin ligase complex AT1G65030

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR020472 G-protein beta WD-40 repeat
IPR001680 WD40 repeat
IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily
Mapman id Description
35.1 not assigned.annotated