Gene: Sopen02g020740
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen02g020740
- Transcript Identifier Sopen02g020740.1
- Gene Type Coding gene
- Location Spenn-ch02 : 44475549-44478746 : negative
Gene Family Information
- ID HOM05D003032
- #Genes/#Species 227/95
- Phylogenetic origin
- ID ORTHO05D003456
- #Genes/#Species 223/95
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen02g020740.1
Descriptions
- Description RNA ligase/cyclic nucleotide phosphodiesterase family protein | CONTAINS InterPro DOMAIN/s: RNA ligase/cyclic nucleotide phosphodiesterase , 2, apos, ,3, apos, -cyclic-nucleotide 3, apos, -phosphodiesterase | BEST Arabidopsis thaliana protein match is: RNA ligase/cyclic nucleotide phosphodiesterase family protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006388 | ISO | PLAZA Integrative Orthology | tRNA splicing, via endonucleolytic cleavage and ligation | AT4G18930 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004112 | IEA | InterPro | cyclic-nucleotide phosphodiesterase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT4G18930 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |