Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sopen03g001940 RNA ligase/cyclic nucleotide phosphodiesterase family protein | CONTAINS InterPro DOMAIN/s: RNA ligase/cyclic nucleotide phosphodiesterase , 2, apos, ,3, apos, -cyclic-nucleotide 3, apos, -phosphodiesterase | BEST Arabidopsis thaliana protein match is: RNA ligase/cyclic nucleotide phosphodiesterase family protein Spenn-ch03 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G1600 LG-6 + View
Actinidia chinensis Actinidia07660 Lachesis_group6 - View
Arabidopsis lyrata AL7G35230 scaffold_7 - View
Avicennia marina MSTRG.16186 ScioBoG_19538_HRSCAF_19626 + View
Amaranthus hybridus Ah.14g086880 Cyclic phosphodiesterase (CPDase) (EC 3.1.4.-) AmaHy_arrow1_Scaffold_14 - View
Aquilegia oxysepala Aqoxy1G01906 CHR01 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.H1W4M4 PTHR28141//PTHR28141:SF1 - FAMILY NOT NAMED // 2',3'-CYCLIC-NUCLEOTIDE 3'-PHOSPHODIESTERASE arahy.Tifrunner.gnm1.Arahy.13 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.KAT3SX PF07823 - Cyclic phosphodiesterase-like protein (CPDase) arahy.Tifrunner.gnm1.Arahy.03 + View
Arabidopsis thaliana AT4G18930 RNA ligase/cyclic nucleotide phosphodiesterase family protein RNA ligase/cyclic nucleotide phosphodiesterase family protein%3B CONTAINS InterPro DOMAIN/s: RNA ligase/cyclic nucleotide phosphodiesterase (InterPro:IPR009097)%2C 2%26apos%3B%2C3%26apos%3B-cyclic-nucleotide 3%26apos%3B-phosphodiesterase (InterPro:IPR012386)%3B BEST Arabidopsis thaliana protein match is: RNA ligase/cyclic nucleotide phosphodiesterase family protein (TAIR:AT4G18940.1)%3B Has 112 Blast hits to 112 proteins in 29 species: Archae - 3%3B Bacteria - 12%3B Metazoa - 0%3B Fungi - 8%3B Plants - 58%3B Viruses - 0%3B Other Eukaryotes - 31 (source: NCBI BLink). Chr4 + View
Brassica carinata BcaB04g18509 ChrB04 + View
Brassica carinata BcaNung04871 Contig1773 + View
Brassica napus C03p81580 C03 + View
Brassica napus A08p14060 A08 + View
Brassica oleracea BolC3t20428H C3 + View
Brassica rapa BraA08t33399Z A08 + View
Beta vulgaris EL10Ac8g19853 PTHR28141//PTHR28141:SF1 - FAMILY NOT NAMED // 2',3'-CYCLIC-NUCLEOTIDE 3'-PHOSPHODIESTERASE Chr8_EL10_PGA_scaffold4 - View
Camellia sinensis var. sinensis CSS0022910 Cyclic phosphodiesterase family protein [Populus trichocarpa] Chr8 + View
Capsicum annuum CAN.G1569.21 PGAv.1.6.scaffold1569 + View
Capsicum annuum CAN.G411.4 PGAv.1.6.scaffold411 - View
Cannabis sativa CANSAT35G1927 NC_044378.1 - View
Cicer arietinum L. Ca_17879_v3 Ca_LG6_v3 - View
Corylus avellana Haze_05444 Similar to At4g18930: Cyclic phosphodiesterase (Arabidopsis thaliana OX%3D3702) 2 + View
Coffea canephora Cc02_g16060 Cyclic phosphodiesterase chr2 + View
Citrus clementina Ciclev10016833m.g scaffold_2 + View
Ceratophyllum demersum CDE02G4586 1 - View
Carpinus fangiana Cfa001065 Cfa01 - View
Cardamine hirsuta CARHR225810 Cyclic phosphodiesterase Chr7 + View
Carya illinoinensis CiPaw.09G133700 PF07823 - Cyclic phosphodiesterase-like protein (CPDase) Chr09 - View
Citrullus lanatus ClCG01G024060 Cyclic phosphodiesterase family protein CG_Chr01 + View
Cucumis melo MELO3C007183.2 RNA ligase/cyclic nucleotide phosphodiesterase chr08 - View
Corchorus olitorius COL.COLO4_22831 RNA ligase/cyclic nucleotide phosphodiesterase AWUE01018073.1 - View
Carica papaya Cpa.g.sc17.159 supercontig_17 + View
Chenopodium quinoa AUR62035853 Protein of unknown function C_Quinoa_Scaffold_1759 - View
Chenopodium quinoa AUR62027656 Protein of unknown function C_Quinoa_Scaffold_1125 - View
Capsella rubella Carub.0007s2224 PTHR28141//PTHR28141:SF1 - FAMILY NOT NAMED // 2',3'-CYCLIC-NUCLEOTIDE 3'-PHOSPHODIESTERASE scaffold_7 - View
Cucumis sativus L. CsaV3_6G051200 cyclic phosphodiesterase-like chr6 + View
Daucus carota DCAR_027964 hypothetical protein DCARv2_Chr8 - View
Davidia involucrata Dinv12722 GWHABJS00000020 - View
Durio zibethinus Duzib160G0697 NW_019168015.1 - View
Erigeron canadensis ECA236G0712 Conyza_canadensis_scaffold:3 - View
Eucalyptus grandis Eucgr.E02853 Chr05 - View
Erythranthe guttata Migut.M00987 scaffold_13 - View
Eutrema salsugineum Thhalv10026969m.g PTHR28141:SF1 - 2',3'-CYCLIC-NUCLEOTIDE 3'-PHOSPHODIESTERASE scaffold_1 - View
Fragaria x ananassa FAN25G2432 PF07823 - Cyclic phosphodiesterase-like protein (CPDase) Fvb3-1 + View
Fragaria x ananassa FAN11G3274 PF07823 - Cyclic phosphodiesterase-like protein (CPDase) Fvb3-4 + View
Fragaria x ananassa FAN21G3139 PF07823 - Cyclic phosphodiesterase-like protein (CPDase) Fvb3-2 - View
Fragaria x ananassa FAN21G3669 PTHR28141:SF1 - 2',3'-CYCLIC-NUCLEOTIDE 3'-PHOSPHODIESTERASE Fvb3-2 + View
Fragaria x ananassa FAN16G0417 PTHR28141:SF1 - 2',3'-CYCLIC-NUCLEOTIDE 3'-PHOSPHODIESTERASE Fvb3-3 - View
Fragaria vesca FvH4_3g06750 PF07823 - Cyclic phosphodiesterase-like protein (CPDase) Fvb3 - View
Gossypium hirsutum Gohir.A06G122300 PTHR28141//PTHR28141:SF1 - FAMILY NOT NAMED // 2',3'-CYCLIC-NUCLEOTIDE 3'-PHOSPHODIESTERASE A06 + View
Gossypium hirsutum Gohir.D06G140200 PF07823 - Cyclic phosphodiesterase-like protein (CPDase) D06 - View
Glycine max Glyma.05G163100 PF07823 - Cyclic phosphodiesterase-like protein (CPDase) Gm05 + View
Gossypium raimondii Gorai.010G163600 Chr10 - View
Hydrangea macrophylla Hma1.2p1_0336F.1_g129000 Hma1.2p1_0336F.1 + View
Lupinus albus Lalb_Chr07g0186181 PTHR28141//PTHR28141:SF1 - FAMILY NOT NAMED // 2',3'-CYCLIC-NUCLEOTIDE 3'-PHOSPHODIESTERASE Lalb_Chr07 - View
Lotus japonicus Lj4g0005760 PTHR28141:SF1 - 2',3'-CYCLIC-NUCLEOTIDE 3'-PHOSPHODIESTERASE chr4 - View
Lonicera japonica Lj1A1178T70 GWHAAZE00000001 + View
Lactuca sativa Lsat_1_v5_gn_7_26960 Lsat_1_v8_lg_7 + View
Malus domestica MD10G1271200 RNA ligase/cyclic nucleotide phosphodiesterase family protein Chr10 - View
Manihot esculenta Manes.17G061800 Chromosome17 + View
Medicago truncatula Medtr8g087820 cyclic phosphodiesterase-like protein chr8 + View
Nicotiana tabacum Nitab4.5_0000982g0010 RNA ligase/cyclic nucleotide phosphodiesterase, 2',3'-cyclic-nucleotide 3'-phosphodiesterase Nitab4.5_0000982 + View
Olea europaea Oeu040942.1 chr13 + View
Punica granatum PGR042G1118 NC_045130.1 + View
Prunus persica Prupe.4G070300 PF07823 - Cyclic phosphodiesterase-like protein (CPDase) Pp04 + View
Pisum sativum Psat7g066960 Cyclic phosphodiesterase-like protein chr7LG7 - View
Populus trichocarpa Potri.011G075600 PTHR28141//PTHR28141:SF1 - FAMILY NOT NAMED // 2',3'-CYCLIC-NUCLEOTIDE 3'-PHOSPHODIESTERASE Chr11 + View
Phaseolus vulgaris Phvul.002G243100 PTHR28141:SF1 - 2',3'-CYCLIC-NUCLEOTIDE 3'-PHOSPHODIESTERASE Chr02 + View
Quercus lobata QL05p052148 5 + View
Quercus lobata QL05p049864 5 - View
Rosa chinensis RcHm_v2.0_Chr5g0012411 RcHm_v2.0_Chr5 + View
Rhododendron simsii Rhsim02G0150300 chr02 + View
Salvia bowleyana SalBow8G3374 GWHASIU00000004 + View
Salix brachista Sabra11G0062800 GWHAAZH00000011 + View
Simmondsia chinensis Sc05g0006760 GWHAASQ00000005 - View
Sechium edule Sed0013474 LG10 - View
Sechium edule Sed0025293 LG14 + View
Solanum lycopersicum Solyc03g005930.3 Cyclic phosphodiesterase (AHRD V3.3 *** A0A2G2ZL60_CAPAN) SL4.0ch03 - View
Solanum lycopersicum Solyc02g071750.3 cyclic phosphodiesterase-like (AHRD V3.3 *** A0A1S4BIY5_TOBAC) SL4.0ch02 - View
Schrenkiella parvula Sp7g17640 PTHR28141:SF1 - 2',3'-CYCLIC-NUCLEOTIDE 3'-PHOSPHODIESTERASE ch7-4 + View
Solanum tuberosum PGSC0003DMG400028444 Cyclic phosphodiesterase ST4.03ch02 - View
Selenicereus undatus Hund21459 Scaffold_33680 + View
Trochodendron aralioides TAR624G1316 group9 - View
Theobroma cacao Thecc.06G161100 Chromosome_6 - View
Tarenaya hassleriana THA.LOC104798447 cyclic phosphodiesterase isoform X1 NW_010967966.1 + View
Trifolium pratense TPR.G6813 Tp57577_TGAC_v2_LG3 + View
Tripterygium wilfordii TWI73G0283 NC_052232.1 - View
Tripterygium wilfordii TWI09G1589 NC_052245.1 + View
Vaccinium macrocarpon vmacro10933 Similar to At4g18930: Cyclic phosphodiesterase (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0251G3180 CM024069.1 + View
Vitis vinifera GSVIVG01021300001 chr10 + View