Gene: Sopen02g020410
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen02g020410
- Transcript Identifier Sopen02g020410.1
- Gene Type Coding gene
- Location Spenn-ch02 : 44202411-44209568 : negative
Gene Family Information
- ID HOM05D000002
- #Genes/#Species 26594/98
- Phylogenetic origin
- ID ORTHO05D000001
- #Genes/#Species 28434/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Sopen02g020410.1
Descriptions
- Description Retrovirus-related Pol polyprotein from transposon TNT 1-94 | Reverse transcriptase (EC 2.7.7.49) | Endonuclease) - Nicotiana tabacum (Common tobacco), 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, iron ion binding | INVOLVED IN: oxidation reduction, flavonoid biosynthetic process | LOCATED IN: cellular_component unknown | CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase , Oxoglutarate/iron-dependent oxygenase | BEST Arabidopsis thaliana protein match is: senescence-related gene 1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015074 | IEA | InterPro | DNA integration |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0008270 | IEA | InterPro | zinc ion binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR012337 | Ribonuclease H-like superfamily |
| IPR043502 | DNA/RNA polymerase superfamily |
| IPR013103 | Reverse transcriptase, RNA-dependent DNA polymerase |
| IPR036397 | Ribonuclease H superfamily |
| IPR025724 | GAG-pre-integrase domain |
| IPR001584 | Integrase, catalytic core |
| IPR044861 | Isopenicillin N synthase-like, Fe(2+) 2OG dioxygenase domain |
| IPR027443 | Isopenicillin N synthase-like superfamily |
| IPR036875 | Zinc finger, CCHC-type superfamily |
| IPR026992 | Non-haem dioxygenase N-terminal domain |
| Mapman id | Description |
|---|---|
| 50.1.13 | Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen |