Gene: Sopen02g014570

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g014570
  • Transcript Identifier Sopen02g014570.2
  • Gene Type Coding gene
  • Location Spenn-ch02 : 38478310-38482684 : negative

Gene Family Information

  • ID HOM05D000878
  • #Genes/#Species 677/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g014570.2

Descriptions

  • Description Malate dehydrogenase, glyoxysomal precursor (EC 1.1.1.37) - Glycine max (Soybean), encodes an peroxisomal NAD-malate dehydrogenase that is involved in fatty acid beta-oxidation through providing NAD to the process of converting fatty acyl CoA to acetyl CoA. | peroxisomal NAD-malate dehydrogenase 1 (PMDH1) | FUNCTIONS IN: in 6 functions | INVOLVED IN: regulation of fatty acid beta-oxidation, regulation of photorespiration | LOCATED IN: chloroplast, peroxisome | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Lactate/malate dehydrogenase, N-terminal , Lactate/malate dehydrogenase, C-terminal , NAD(P)-binding domain , Malate dehydrogenase, NAD-dependent, eukaryote/gamma proteobacteria , L-lactate/malate dehydrogenase , Malate dehydrogenase, active site , Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal | BEST Arabidopsis thaliana protein match is: peroxisomal NAD-malate dehydrogenase 2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0006099
IEA
InterProtricarboxylic acid cycle
GO:0019752
IEA
InterProcarboxylic acid metabolic process
GO:0080093
ISO
PLAZA Integrative Orthologyregulation of photorespiration AT2G22780
GO:0031998
ISO
PLAZA Integrative Orthologyregulation of fatty acid beta-oxidation AT2G22780

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
InterProcatalytic activity
GO:0016616
IEA
InterProoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0030060
IEA
InterProL-malate dehydrogenase activity
GO:0016491
IEA
InterProoxidoreductase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005777
ISO
PLAZA Integrative Orthologyperoxisome AT2G22780
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT2G22780

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal
IPR022383 Lactate/malate dehydrogenase, C-terminal
IPR010097 Malate dehydrogenase, type 1
IPR001557 L-lactate/malate dehydrogenase
IPR001236 Lactate/malate dehydrogenase, N-terminal
IPR036291 NAD(P)-binding domain superfamily
Mapman id Description
5.7.3.6.5 Lipid metabolism.lipid degradation.fatty acid degradation.glyoxylate cycle.peroxisomal NAD-dependent malate dehydrogenase