Gene: Sopen01g053210
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen01g053210
- Transcript Identifier Sopen01g053210.1
- Gene Type Coding gene
- Location Spenn-ch01 : 108353223-108357949 : positive
Gene Family Information
- ID HOM05D003396
- #Genes/#Species 201/93
- Phylogenetic origin
- ID ORTHO05D003646
- #Genes/#Species 211/94
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen01g053210.1
Descriptions
- Description Translocon-associated protein (TRAP), alpha subunit | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: endomembrane system, endoplasmic reticulum | EXPRESSED IN: 20 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Translocon-associated protein (TRAP), alpha subunit | BEST Arabidopsis thaliana protein match is: Translocon-associated protein (TRAP), alpha subunit
- Loading (ortholog descriptions from ath)...
Functional Annotation
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005789 | IEA | InterPro | endoplasmic reticulum membrane | |
| GO:0005783 | ISO | PLAZA Integrative Orthology | endoplasmic reticulum | AT2G21160 |
| GO:0005794 | ISO | PLAZA Integrative Orthology | Golgi apparatus | AT2G21160 |
| GO:0005774 | ISO | PLAZA Integrative Orthology | vacuolar membrane | AT2G21160 |
| GO:0005773 | ISO | PLAZA Integrative Orthology | vacuole | AT2G21160 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT2G21160 |
| GO:0009535 | ISO | PLAZA Integrative Orthology | chloroplast thylakoid membrane | AT2G21160 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR005595 | Translocon-associated protein (TRAP), alpha subunit |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |