Gene: Sopen01g053180
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen01g053180
- Transcript Identifier Sopen01g053180.1
- Gene Type Coding gene
- Location Spenn-ch01 : 108332098-108337827 : negative
Gene Family Information
- ID HOM05D001403
- #Genes/#Species 446/100
- Phylogenetic origin
- ID ORTHO05D001313
- #Genes/#Species 434/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen01g053180.1
Descriptions
- Description Triosephosphate isomerase, chloroplast precursor (EC 5.3.1.1) (TIM) (Triose-phosphate isomerase) - Spinacia oleracea (Spinach), Encodes a plastidic triose phosphate isomerase. Mutants with reduced pdTPI levels have difficulty transitioning from heterotrophic to autotrophic growth. The related phenotypes, such as chlorosis in light-grown seedlings may result from an accumulation of dihydroxyacetone phosphate (DHAP) and methylglyoxal (MG) in these mutants. Both splice variants appear to be expressed, but the At2g21170.2 variant appears to have a much narrower expression range limited to roots. | triosephosphate isomerase (TIM) | FUNCTIONS IN: triose-phosphate isomerase activity | INVOLVED IN: in 7 processes | LOCATED IN: thylakoid, mitochondrion, apoplast, chloroplast | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Triosephosphate isomerase, active site , Aldolase-type TIM barrel , Triosephosphate isomerase | BEST Arabidopsis thaliana protein match is: triosephosphate isomerase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0080022 | ISO | PLAZA Integrative Orthology | primary root development | AT2G21170 |
| GO:0009658 | ISO | PLAZA Integrative Orthology | chloroplast organization | AT2G21170 |
| GO:0006642 | ISO | PLAZA Integrative Orthology | triglyceride mobilization | AT2G21170 |
| GO:0032504 | ISO | PLAZA Integrative Orthology | multicellular organism reproduction | AT2G21170 |
| GO:0046166 | ISO | PLAZA Integrative Orthology | glyceraldehyde-3-phosphate biosynthetic process | AT2G21170 |
| GO:0019563 | ISO | PLAZA Integrative Orthology | glycerol catabolic process | AT2G21170 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0004807 | IEA | InterPro | triose-phosphate isomerase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT2G21170 |
| GO:0009941 | ISO | PLAZA Integrative Orthology | chloroplast envelope | AT2G21170 |
| GO:0009579 | ISO | PLAZA Integrative Orthology | thylakoid | AT2G21170 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT2G21170 |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT2G21170 |
| GO:0048046 | ISO | PLAZA Integrative Orthology | apoplast | AT2G21170 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT2G21170 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |