Gene: AT2G21170
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G21170
- Transcript Identifier AT2G21170.3
- Gene Type Coding gene
- Location Chr2 : 9071047-9073106 : negative
Gene Family Information
- ID HOM05D001403
- #Genes/#Species 446/100
- Phylogenetic origin
- ID ORTHO05D001313
- #Genes/#Species 434/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT2G21170.3
- symbol TIM
- Alias PDTPI,PLASTID ISOFORM TRIOSE PHOSPHATE ISOMERASE
- uniprot Q9SKP6
Descriptions
- Description triosephosphate isomerase
- Computational description triosephosphate isomerase (TIM); FUNCTIONS IN: triose-phosphate isomerase activity; INVOLVED IN: in 7 processes; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Triosephosphate isomerase, active site (InterPro:IPR020861), Aldolase-type TIM barrel (InterPro:IPR013785), Triosephosphate isomerase (InterPro:IPR000652); BEST Arabidopsis thaliana protein match is: triosephosphate isomerase (TAIR:AT3G55440.1); Has 11587 Blast hits to 11585 proteins in 3635 species: Archae - 138; Bacteria - 6210; Metazoa - 1207; Fungi - 243; Plants - 472; Viruses - 0; Other Eukaryotes - 3317 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006096 | IBA IEA | Gene Ontology | glycolytic process | 1 |
| GO:0019563 | IMP IBA | Gene Ontology | glycerol catabolic process | 1 2 |
| GO:0006094 | IBA | Gene Ontology | gluconeogenesis | 1 |
| GO:0046166 | IDA IBA | Gene Ontology | glyceraldehyde-3-phosphate biosynthetic process | 1 2 |
| GO:0019253 | IEA | Gene Ontology | reductive pentose-phosphate cycle | |
| GO:0006642 | IMP | Gene Ontology | triglyceride mobilization | 2 |
| GO:0009658 | IMP | Gene Ontology | chloroplast organization | 2 |
| GO:0032504 | IMP | Gene Ontology | multicellular organism reproduction | 2 |
| GO:0080022 | IMP | Gene Ontology | primary root development | 2 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004807 | IDA IBA IEA | Gene Ontology | triose-phosphate isomerase activity | 1 2 |
| GO:0004807 | IEA | InterPro | triose-phosphate isomerase activity | |
| GO:0016853 | IEA | GOA Database | isomerase activity | |
| GO:0003824 | IEA | GOA Database | catalytic activity | |
| GO:0003824 | IEA | InterPro | catalytic activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005739 | IDA | GOA Database | mitochondrion | |
| GO:0005739 | HDA | Gene Ontology | mitochondrion | 3 |
| GO:0005829 | IDA | GOA Database | cytosol | |
| GO:0005829 | IBA | Gene Ontology | cytosol | 1 |
| GO:0009507 | IEA | GOA Database | chloroplast | |
| GO:0009507 | IDA, HDA ISM | Gene Ontology | chloroplast | 2 4 |
| GO:0009570 | IDA | GOA Database | chloroplast stroma | |
| GO:0009570 | HDA | Gene Ontology | chloroplast stroma | 5 |
| GO:0009941 | IDA | GOA Database | chloroplast envelope | |
| GO:0009941 | HDA | Gene Ontology | chloroplast envelope | 6 |
| GO:0048046 | IDA | GOA Database | apoplast | |
| GO:0048046 | HDA | Gene Ontology | apoplast | 7 |
| GO:0009579 | IDA | GOA Database | thylakoid | |
| GO:0009579 | HDA | Gene Ontology | thylakoid | 8 |
| GO:0009536 | IEA | GOA Database | plastid |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |