Gene: Sopen01g052030
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen01g052030
- Transcript Identifier Sopen01g052030.1
- Gene Type Coding gene
- Location Spenn-ch01 : 107506461-107509568 : negative
Gene Family Information
- ID HOM05D002765
- #Genes/#Species 250/99
- Phylogenetic origin
- ID ORTHO05D003083
- #Genes/#Species 245/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen01g052030.1
Descriptions
- Description Bifunctional dihydrofolate reductase-thymidylate synthase (DHFR-TS) | Thymidylate synthase (EC 2.1.1.45)) - Glycine max (Soybean), Encodes a bifunctional dihydrofolate reductase - thymidylate synthase gene. This is unique in Arabidopsis and protozoa. Other organisms have independent genes for this function. | thymidylate synthase 1 (THY-1) | CONTAINS InterPro DOMAIN/s: Thymidylate synthase, active site , Dihydrofolate reductase domain , Dihydrofolate reductase conserved site , Bifunctional dihydrofolate reductase/thymidylate synthase , Thymidylate synthase | BEST Arabidopsis thaliana protein match is: thymidylate synthase 2
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006231 | IEA | InterPro | dTMP biosynthetic process | |
| GO:0006730 | IEA | InterPro | one-carbon metabolic process | |
| GO:0046654 | IEA | InterPro | tetrahydrofolate biosynthetic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004799 | IEA | InterPro | thymidylate synthase activity | |
| GO:0004146 | IEA | InterPro | dihydrofolate reductase activity | |
| GO:0016741 | IEA | InterPro | transferase activity, transferring one-carbon groups | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G16370 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT2G16370 |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT4G34570 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT2G16370 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000398 | Thymidylate synthase |
| IPR012262 | Bifunctional dihydrofolate reductase/thymidylate synthase |
| IPR036926 | Thymidylate synthase/dCMP hydroxymethylase superfamily |
| IPR023451 | Thymidylate synthase/dCMP hydroxymethylase domain |
| IPR001796 | Dihydrofolate reductase domain |
| IPR024072 | Dihydrofolate reductase-like domain superfamily |
| IPR045097 | Thymidylate synthase/dCMP hydroxymethylase |