Gene: Sopen01g051730

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g051730
  • Transcript Identifier Sopen01g051730.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 107272990-107281175 : positive

Gene Family Information

  • ID HOM05D002700
  • #Genes/#Species 255/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g051730.1

Descriptions

  • Description coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative | FUNCTIONS IN: clathrin binding, structural molecule activity, binding | INVOLVED IN: intracellular protein transport, vesicle-mediated transport | LOCATED IN: chloroplast, membrane | EXPRESSED IN: 26 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Coatomer, gamma subunit, appendage, Ig-like subdomain , Armadillo-like helical , Clathrin/coatomer adaptor, adaptin-like, N-terminal , Coatomer, gamma subunit , Coatomer, gamma subunit , appendage , Armadillo-type fold , Clathrin alpha-adaptin/coatomer adaptor, appendage, C-terminal subdomain , Clathrin/coatomer adaptor, adaptin-like, appendage, C-terminal subdomain , Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain | BEST Arabidopsis thaliana protein match is: structural molecules
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006886
IEA
InterProintracellular protein transport
GO:0016192
IEA
InterProvesicle-mediated transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005198
IEA
InterProstructural molecule activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030126
IEA
InterProCOPI vesicle coat
GO:0030117
IEA
InterPromembrane coat
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT4G34450
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT4G34450
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT4G34450
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT4G34450

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013040 Coatomer, gamma subunit, appendage, Ig-like subdomain
IPR016024 Armadillo-type fold
IPR017106 Coatomer gamma subunit
IPR037067 Coatomer, gamma subunit, appendage domain superfamily
IPR011989 Armadillo-like helical
IPR002553 Clathrin/coatomer adaptor, adaptin-like, N-terminal
IPR032154 Coatomer subunit gamma, C-terminal
IPR013041 Clathrin adaptor, appendage, Ig-like subdomain superfamily
IPR012295 TBP domain superfamily
IPR009028 Coatomer/calthrin adaptor appendage, C-terminal subdomain
Mapman id Description
22.2.1.1.4.2 Vesicle trafficking.Golgi-ER retrograde trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.subunit gamma