Gene: AT4G34450

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G34450
  • Transcript Identifier AT4G34450.1
  • Gene Type Coding gene
  • Location Chr4 : 16471956-16476795 : positive

Gene Family Information

  • ID HOM05D002700
  • #Genes/#Species 255/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G34450.1
  • uniprot Q0WW26

Descriptions

  • Description coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP
  • Computational description coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative; FUNCTIONS IN: clathrin binding, structural molecule activity, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Coatomer, gamma subunit, appendage, Ig-like subdomain (InterPro:IPR013040), Armadillo-like helical (InterPro:IPR011989), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553), Coatomer, gamma subunit (InterPro:IPR017106), Coatomer, gamma subunit , appendage (InterPro:IPR014863), Armadillo-type fold (InterPro:IPR016024), Clathrin alpha-adaptin/coatomer adaptor, appendage, C-terminal subdomain (InterPro:IPR015873), Clathrin/coatomer adaptor, adaptin-like, appendage, C-terminal subdomain (InterPro:IPR009028), Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain (InterPro:IPR013041); BEST Arabidopsis thaliana protein match is: structural molecules (TAIR:AT2G16200.1); Has 1647 Blast hits to 1638 proteins in 222 species: Archae - 2; Bacteria - 2; Metazoa - 707; Fungi - 446; Plants - 176; Viruses - 0; Other Eukaryotes - 314 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016192
IEA
GOA Databasevesicle-mediated transport
GO:0016192
IEA
InterProvesicle-mediated transport
GO:0006886
IEA
Gene Ontologyintracellular protein transport
GO:0006886
IEA
InterProintracellular protein transport
GO:0015031
IEA
GOA Databaseprotein transport
GO:0006888
IBA
Gene Ontologyendoplasmic reticulum to Golgi vesicle-mediated transport1
GO:0009306
IBA
Gene Ontologyprotein secretion1
GO:0006891
IBA
Gene Ontologyintra-Golgi vesicle-mediated transport1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005198
IEA
Gene Ontologystructural molecule activity
GO:0005198
IEA
InterProstructural molecule activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
IDA
GOA Databaseplasma membrane
GO:0005886
HDA
Gene Ontologyplasma membrane2
GO:0030117
IEA
GOA Databasemembrane coat
GO:0030117
IEA
InterPromembrane coat
GO:0030126
IEA
GOA DatabaseCOPI vesicle coat
GO:0030126
IBA
Gene OntologyCOPI vesicle coat1
GO:0030126
IEA
InterProCOPI vesicle coat
GO:0016020
IEA
GOA Databasemembrane
GO:0031410
IEA
GOA Databasecytoplasmic vesicle
GO:0005794
IEA
GOA DatabaseGolgi apparatus
GO:0009506
IDA
GOA Databaseplasmodesma
GO:0009506
HDA
Gene Ontologyplasmodesma3
GO:0005829
IDA
GOA Databasecytosol
GO:0009507
IDA
GOA Databasechloroplast
GO:0009507
HDA
Gene Ontologychloroplast4
GO:0005737
IEA
GOA Databasecytoplasm
GO:0000139
IEA
GOA DatabaseGolgi membrane
GO:0000139
IBA
Gene OntologyGolgi membrane1
GO:0030663
IEA
GOA DatabaseCOPI-coated vesicle membrane
GO:0005793
IBA
Gene Ontologyendoplasmic reticulum-Golgi intermediate compartment1
GO:0005783
IBA
Gene Ontologyendoplasmic reticulum1
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011989 Armadillo-like helical
IPR032154 Coatomer subunit gamma, C-terminal
IPR013040 Coatomer, gamma subunit, appendage, Ig-like subdomain
IPR017106 Coatomer gamma subunit
IPR012295 TBP domain superfamily
IPR016024 Armadillo-type fold
IPR037067 Coatomer, gamma subunit, appendage domain superfamily
IPR009028 Coatomer/calthrin adaptor appendage, C-terminal subdomain
IPR013041 Clathrin adaptor, appendage, Ig-like subdomain superfamily
IPR002553 Clathrin/coatomer adaptor, adaptin-like, N-terminal
Mapman id Description
22.2.1.1.4.2 Vesicle trafficking.Golgi-ER retrograde trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.subunit gamma