Gene: Sopen01g044360

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g044360
  • Transcript Identifier Sopen01g044360.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 101244853-101247233 : negative

Gene Family Information

  • ID HOM05D000049
  • #Genes/#Species 4493/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g044360.1

Descriptions

  • Description A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct. | ADP-ribosylation factor A1E (ARFA1E) | CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor , Small GTP-binding protein , Ras small GTPase, Rab type , Small GTPase SAR1-type , ARF/SAR superfamily | BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein ., ADP-ribosylation factor 2 - Oryza sativa (Rice), Small GTPase superfamily, ARF/SAR type
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0098876
ISO
PLAZA Integrative Orthologyvesicle-mediated transport to the plasma membrane AT2G47170
GO:0090354
ISO
PLAZA Integrative Orthologyregulation of auxin metabolic process AT2G47170
GO:0031001
ISO
PLAZA Integrative Orthologyresponse to brefeldin A AT2G47170

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003924
IEA
InterProGTPase activity
GO:0005525
IEA
InterProGTP binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G47170
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT2G47170
GO:0016004
ISO
PLAZA Integrative Orthologyphospholipase activator activity AT2G47170

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005802
ISO
PLAZA Integrative Orthologytrans-Golgi network AT2G47170
GO:0005769
ISO
PLAZA Integrative Orthologyearly endosome AT2G47170
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT3G62290
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT2G47170
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT3G62290
GO:0005798
ISO
PLAZA Integrative OrthologyGolgi-associated vesicle AT2G47170

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006689 Small GTPase superfamily, ARF/SAR type
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR005225 Small GTP-binding protein domain
Mapman id Description
22.3.2.1 Vesicle trafficking.post-Golgi trafficking.coat protein recruiting.ARF-GTPase