Gene: AT2G47170
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G47170
- Transcript Identifier AT2G47170.1
- Gene Type Coding gene
- Location Chr2 : 19367264-19368518 : positive
Gene Family Information
- ID HOM05D000049
- #Genes/#Species 4493/100
- Phylogenetic origin
- ID ORTHO05D000027
- #Genes/#Species 3658/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT2G47170.1
- symbol ARF1A1C
- uniprot P36397
Descriptions
- Description Ras-related small GTP-binding family protein
- Computational description ARF1A1C; FUNCTIONS IN: phospholipase activator activity, GTP binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: Golgi-associated vesicle; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor A1F (TAIR:AT1G10630.1); Has 15041 Blast hits to 15022 proteins in 509 species: Archae - 14; Bacteria - 51; Metazoa - 7725; Fungi - 1942; Plants - 2032; Viruses - 3; Other Eukaryotes - 3274 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016192 | IEA | GOA Database | vesicle-mediated transport | |
| GO:0016192 | IBA | Gene Ontology | vesicle-mediated transport | 1 |
| GO:0015031 | IEA | GOA Database | protein transport | |
| GO:0009734 | IEA | GOA Database | auxin-activated signaling pathway | |
| GO:0050790 | IEA | GOA Database | regulation of catalytic activity | |
| GO:0006886 | IBA | Gene Ontology | intracellular protein transport | 1 |
| GO:0098876 | IMP | Gene Ontology | vesicle-mediated transport to the plasma membrane | 2 |
| GO:0090354 | IMP | Gene Ontology | regulation of auxin metabolic process | 2 |
| GO:0031001 | IMP | Gene Ontology | response to brefeldin A | 2 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003729 | IDA | Gene Ontology | mRNA binding | 3 |
| GO:0005525 | IEA | GOA Database | GTP binding | |
| GO:0005525 | ISS, IBA TAS | Gene Ontology | GTP binding | 1 4 |
| GO:0005525 | IEA | InterPro | GTP binding | |
| GO:0003924 | IEA | Gene Ontology | GTPase activity | |
| GO:0003924 | IEA | InterPro | GTPase activity | |
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0005515 | IPI | Gene Ontology | protein binding | 5 |
| GO:0016004 | TAS | Gene Ontology | phospholipase activator activity | 4 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005768 | IEA | GOA Database | endosome | |
| GO:0005769 | IEA | GOA Database | early endosome | |
| GO:0005769 | IDA | Gene Ontology | early endosome | 2 |
| GO:0005794 | IEA | GOA Database | Golgi apparatus | |
| GO:0005794 | IDA, HDA ISM | Gene Ontology | Golgi apparatus | 2 6 |
| GO:0005737 | IBA | Gene Ontology | cytoplasm | 1 |
| GO:0005829 | HDA RCA | Gene Ontology | cytosol | 7 8 |
| GO:0005802 | IDA | Gene Ontology | trans-Golgi network | 9 |
| GO:0005798 | IDA | Gene Ontology | Golgi-associated vesicle |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 22.3.2.1 | Vesicle trafficking.post-Golgi trafficking.coat protein recruiting.ARF-GTPase |