Gene: Sopen01g035990

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g035990
  • Transcript Identifier Sopen01g035990.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 93976901-94008785 : positive

Gene Family Information

  • ID HOM05D004422
  • #Genes/#Species 162/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g035990.1

Descriptions

  • Description glycine-tRNA ligase | EMBRYO-DEFECTIVE-DEVELOPMENT 1 (EDD1) | FUNCTIONS IN: glycine-tRNA ligase activity | INVOLVED IN: regulation of embryonic development, glycyl-tRNA aminoacylation, embryo development ending in seed dormancy | LOCATED IN: mitochondrion, chloroplast stroma, chloroplast | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Glycyl-tRNA synthetase, class IIc, beta subunit, N-terminal , Glycyl-tRNA synthetase, class II, heterodimeric , Glycyl-tRNA synthetase, class IIc, beta subunit , Glycyl-tRNA synthetase, class IIc, alpha subunit
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006426
IEA
InterProglycyl-tRNA aminoacylation
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT3G48110
GO:0045995
ISO
PLAZA Integrative Orthologyregulation of embryonic development AT3G48110

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000166
IEA
InterPronucleotide binding
GO:0004820
IEA
InterProglycine-tRNA ligase activity
GO:0005524
IEA
InterProATP binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
InterProcytoplasm
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT3G48110
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G48110
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT3G48110

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002310 Glycine-tRNA ligase, alpha subunit
IPR015944 Glycine-tRNA ligase, beta subunit
Mapman id Description
17.2.9 Protein biosynthesis.aminoacyl-tRNA synthetase activities.glycine-tRNA ligase