Gene: Sopen01g035550

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g035550
  • Transcript Identifier Sopen01g035550.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 93609797-93615842 : negative

Gene Family Information

  • ID HOM05D001058
  • #Genes/#Species 576/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g035550.1

Descriptions

  • Description Metacaspase AtMCP1b. Arginine/lysine-specific cysteine protease activity. Induces apoptosis in yeast. Contains Pfam profile PF00656: ICE-like protease (caspase) p20 domain | metacaspase 1 (AMC1) | FUNCTIONS IN: cysteine-type endopeptidase activity | INVOLVED IN: proteolysis, induction of apoptosis | LOCATED IN: chloroplast | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, LSD1-type , Peptidase C14, caspase catalytic | BEST Arabidopsis thaliana protein match is: metacaspase 2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043068
ISO
PLAZA Integrative Orthologypositive regulation of programmed cell death AT1G02170
GO:0043069
ISO
PLAZA Integrative Orthologynegative regulation of programmed cell death AT4G25110

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G02170
GO:0004197
ISO
PLAZA Integrative Orthologycysteine-type endopeptidase activity AT1G02170

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005735 Zinc finger, LSD1-type
IPR029030 Caspase-like domain superfamily
IPR033180 Metacaspase type I, plant
Mapman id Description
27.2.4.2 Multi-process regulation.Programmed Cell Death (PCD) system.vacuole-mediated cell death.metacaspase-like regulator (MCP1)