Gene: AT1G02170

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G02170
  • Transcript Identifier AT1G02170.1
  • Gene Type Coding gene
  • Location Chr1 : 411883-413426 : positive

Gene Family Information

  • ID HOM05D001058
  • #Genes/#Species 576/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G02170.1
  • symbol MC1
  • Alias ATMC1,ARABIDOPSIS THALIANA METACASPASE 1,ATMCPB1,ARABIDOPSIS THALIANA METACASPASE 1B,AtMCP1b,metacaspase 1b,LOL3,LSD ONE LIKE 3,MCP1b,metacaspase 1b
  • uniprot Q7XJE6

Descriptions

  • Description metacaspase 1
  • Computational description metacaspase 1 (AMC1); FUNCTIONS IN: cysteine-type endopeptidase activity; INVOLVED IN: proteolysis, induction of apoptosis; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LSD1-type (InterPro:IPR005735), Peptidase C14, caspase catalytic (InterPro:IPR011600); BEST Arabidopsis thaliana protein match is: metacaspase 2 (TAIR:AT4G25110.1); Has 1179 Blast hits to 1148 proteins in 266 species: Archae - 3; Bacteria - 262; Metazoa - 3; Fungi - 268; Plants - 419; Viruses - 0; Other Eukaryotes - 224 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043068
IDA, IGI
Gene Ontologypositive regulation of programmed cell death1 2
GO:0006508
IEA
GOA Databaseproteolysis
GO:0006952
IEA
GOA Databasedefense response

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004197
IDA
IBA
Gene Ontologycysteine-type endopeptidase activity1 3
GO:0005515
IPI
Gene Ontologyprotein binding2
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0008234
IEA
GOA Databasecysteine-type peptidase activity
GO:0008233
IEA
GOA Databasepeptidase activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005735 Zinc finger, LSD1-type
IPR033180 Metacaspase type I, plant
IPR029030 Caspase-like domain superfamily
Mapman id Description
27.2.4.2 Multi-process regulation.Programmed Cell Death (PCD) system.vacuole-mediated cell death.metacaspase-like regulator (MCP1)