Gene: Sopen01g035010

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g035010
  • Transcript Identifier Sopen01g035010.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 92986114-92986623 : negative

Gene Family Information

  • ID HOM05D007082
  • #Genes/#Species 113/89
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g035010.1

Descriptions

  • Description Encodes a protein with similarity to yeast STN1, an OB fold protein involved in protecting yeast telomeres. In Arabidopsis, loss of STN1 function mutations exhibit gross morphological abnormalities and defects in telomere architecture and maintenance. STN1 likely plays a role in telomere end capping. | STN1 | FUNCTIONS IN: nucleic acid binding | INVOLVED IN: telomere capping | LOCATED IN: nuclear chromosome, telomeric region | EXPRESSED IN: root, seed | EXPRESSED DURING: E expanded cotyledon stage | CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like , Nucleic acid-binding, OB-fold , Nucleic acid binding, OB-fold, tRNA/helicase-type
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016233
ISO
PLAZA Integrative Orthologytelomere capping AT1G07130

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G07130

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000781
ISO
PLAZA Integrative Orthologychromosome, telomeric region AT1G07130

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
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InterPro Description
IPR012340 Nucleic acid-binding, OB-fold
IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
IPR040260 Replication factor A protein-like
Mapman id Description
13.2.5.2.1 Cell cycle organisation.DNA replication.telomere replication.telomere integrity maintenance complex.component STN1