Gene: AT1G07130

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G07130
  • Transcript Identifier AT1G07130.1
  • Gene Type Coding gene
  • Location Chr1 : 2187928-2188410 : positive

Gene Family Information

  • ID HOM05D007082
  • #Genes/#Species 113/89
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G07130.1
  • symbol STN1
  • uniprot Q9LMK5

Descriptions

  • Description Nucleic acid-binding, OB-fold-like protein
  • Computational description STN1; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: telomere capping; LOCATED IN: nuclear chromosome, telomeric region; EXPRESSED IN: root, seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365); Has 110 Blast hits to 110 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 57; Fungi - 2; Plants - 47; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016233
IMP
Gene Ontologytelomere capping1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding2
GO:0003697
IBA
Gene Ontologysingle-stranded DNA binding3
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000781
IEA
GOA Databasechromosome, telomeric region
GO:0000781
IDA
Gene Ontologychromosome, telomeric region1
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IBA
Gene Ontologynucleus3
GO:0005694
IEA
GOA Databasechromosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012340 Nucleic acid-binding, OB-fold
IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
IPR040260 Replication factor A protein-like
Mapman id Description
13.2.5.2.1 Cell cycle organisation.DNA replication.telomere replication.telomere integrity maintenance complex.component STN1