Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g035010 Solanum pennellii HOM05D007082 ORTHO05D008895 1.8e-93 345.9 170 100.0
CAN.G410.16 Capsicum annuum HOM05D007082 ORTHO05D008895 1.3e-72 276.6 162 80.9
Nitab4.5_0016351g0010 Nicotiana tabacum HOM05D007082 ORTHO05D008895 2.9e-72 275.4 162 80.2
Oeu025749.1 Olea europaea HOM05D007082 ORTHO05D008895 3.4e-60 235.3 158 71.5
Cc01_g19180 Coffea canephora HOM05D007082 ORTHO05D008895 1.7e-59 233.0 156 71.8
CSS0029740 Camellia sinensis var. sinensis HOM05D007082 ORTHO05D008895 2.2e-59 232.6 164 68.9
CSS0021912 Camellia sinensis var. sinensis HOM05D007082 ORTHO05D008895 2.8e-59 232.3 164 68.9
Dinv32900 Davidia involucrata HOM05D007082 ORTHO05D008895 1.6e-57 226.5 162 67.9
TAR622G1184 Trochodendron aralioides HOM05D007082 ORTHO05D008895 4.5e-57 224.9 158 66.5
Lj2P1167T48 Lonicera japonica HOM05D007082 ORTHO05D008895 5.9e-57 224.6 153 66.0
SalBow4G2456 Salvia bowleyana HOM05D007082 ORTHO05D008895 3.8e-56 221.9 155 65.8
MSTRG.18253 Avicennia marina HOM05D007082 ORTHO05D008895 1.6e-54 216.5 161 61.5
CiPaw.07G089100 Carya illinoinensis HOM05D007082 ORTHO05D008895 2.8e-54 215.7 156 64.1
RcHm_v2.0_Chr6g0290411 Rosa chinensis HOM05D007082 ORTHO05D008895 6.1e-54 214.5 165 63.0
Migut.D00329 Erythranthe guttata HOM05D007082 ORTHO05D008895 1.8e-53 213.0 155 64.5
Ciclev10022619m.g Citrus clementina HOM05D007082 ORTHO05D008895 2.3e-53 212.6 154 63.6
SGA_v2.0_scaffold12G06137 Striga asiatica HOM05D003153 ORTHO05D008895 3.0e-53 212.2 161 61.5
Cfa004492 Carpinus fangiana HOM05D007082 ORTHO05D008895 6.8e-53 211.1 156 63.5
Nn5g27058 Nelumbo nucifera HOM05D007082 ORTHO05D008895 8.9e-53 210.7 156 66.0
Potri.005G212900 Populus trichocarpa HOM05D007082 ORTHO05D008895 8.9e-53 210.7 158 59.5
Haze_04674 Corylus avellana HOM05D007082 ORTHO05D008895 1.2e-52 210.3 156 63.5
vmacro14749 Vaccinium macrocarpon HOM05D007082 ORTHO05D008895 1.5e-52 209.9 166 60.8
MD03G1260600 Malus domestica HOM05D007082 ORTHO05D008895 2.6e-52 209.1 161 65.2
TWI12G0539 Tripterygium wilfordii HOM05D007082 ORTHO05D008895 3.4e-52 208.8 155 63.9
DCAR_002714 Daucus carota HOM05D007082 ORTHO05D008895 5.7e-52 208.0 153 62.7
SGA_v2.0_scaffold1G00512 Striga asiatica HOM05D007082 ORTHO05D008895 5.7e-52 208.0 153 62.7
QL12p020738 Quercus lobata HOM05D007082 ORTHO05D008895 7.5e-52 207.6 156 62.2
Atru.chr5.1487 Acer truncatum HOM05D000296 ORTHO05D000175 1.7e-51 206.5 165 61.2
HanXRQChr05g0154391 Helianthus annuus HOM05D007082 ORTHO05D008895 3.7e-51 205.3 151 62.3
Rhsim13G0027400 Rhododendron simsii HOM05D007082 ORTHO05D008895 4.9e-51 204.9 156 62.8
CANSAT25G2376 Cannabis sativa HOM05D007082 ORTHO05D008895 8.3e-51 204.1 151 63.6
FvH4_2g23151 Fragaria vesca HOM05D007082 ORTHO05D008895 1.1e-50 203.8 158 63.3
Prupe.8G236800 Prunus persica HOM05D004770 ORTHO05D005572 1.1e-50 203.8 158 63.3
FAN20G2212 Fragaria x ananassa HOM05D007082 ORTHO05D008895 5.4e-50 201.4 158 62.0
Haze_10047 Corylus avellana HOM05D007082 ORTHO05D008895 2.0e-49 199.5 156 60.3
Sed0015110 Sechium edule HOM05D007082 ORTHO05D008895 1.3e-48 196.8 160 59.4
Thecc.05G027700 Theobroma cacao HOM05D007082 ORTHO05D008895 3.9e-48 195.3 155 59.4
Sabra05G0162600 Salix brachista HOM05D004770 ORTHO05D005572 5.0e-48 194.9 149 59.1
Manes.01G205300 Manihot esculenta HOM05D007082 ORTHO05D008895 6.6e-48 194.5 150 62.0
Lsat_1_v5_gn_9_86820 Lactuca sativa HOM05D007082 ORTHO05D008895 8.6e-48 194.1 154 60.4
Eucgr.H01442 Eucalyptus grandis HOM05D007082 ORTHO05D008895 1.5e-47 193.4 147 63.3
Actinidia00788 Actinidia chinensis HOM05D004770 ORTHO05D005572 1.9e-47 193.0 160 58.1
Eucgr.H01435 Eucalyptus grandis HOM05D007082 ORTHO05D008895 1.9e-47 193.0 148 59.5
PSO832G2607 Papaver somniferum HOM05D007082 ORTHO05D008895 1.9e-47 193.0 158 55.1
Haze_10052 Corylus avellana HOM05D007082 ORTHO05D008895 2.5e-47 192.6 156 59.0
CsaV3_2G013600 Cucumis sativus L. HOM05D007082 ORTHO05D008895 3.3e-47 192.2 155 58.1
Eucgr.H01429 Eucalyptus grandis HOM05D007082 ORTHO05D008895 3.3e-47 192.2 148 59.5
MELO3C014298.2 Cucumis melo HOM05D007082 ORTHO05D008895 4.3e-47 191.8 155 58.1
Lsat_1_v5_gn_9_6120 Lactuca sativa HOM05D007082 ORTHO05D008895 7.3e-47 191.0 159 59.1
Hund09516 Selenicereus undatus HOM05D007082 ORTHO05D008895 1.2e-46 190.3 160 57.5
Lalb_Chr10g0095561 Lupinus albus HOM05D007082 ORTHO05D008895 1.6e-46 189.9 159 59.7
PSO210G1980 Papaver somniferum HOM05D007082 ORTHO05D008895 1.6e-46 189.9 158 53.8
ClCG07G000420 Citrullus lanatus HOM05D007082 ORTHO05D008895 2.8e-46 189.1 157 57.3
arahy.Tifrunner.gnm1.ann1.4F6QX0 Arachis hypogaea HOM05D007082 ORTHO05D008895 3.6e-46 188.7 159 57.9
Eucgr.H01418 Eucalyptus grandis HOM05D007082 ORTHO05D008895 8.0e-46 187.6 144 62.5
COL.COLO4_14680 Corchorus olitorius HOM05D007082 ORTHO05D008895 2.3e-45 186.0 155 54.8
Lj2g0002316 Lotus japonicus HOM05D007082 ORTHO05D008895 2.3e-45 186.0 163 56.4
arahy.Tifrunner.gnm1.ann1.CZ80LA Arachis hypogaea HOM05D007082 ORTHO05D008895 3.1e-45 185.7 155 58.1
Duzib128G1180 Durio zibethinus HOM05D007082 ORTHO05D008895 4.0e-45 185.3 157 55.4
TPR.G34570 Trifolium pratense HOM05D007082 ORTHO05D008895 4.4e-44 181.8 158 53.8
Cpa.g.sc41.65 Carica papaya HOM05D007082 ORTHO05D008895 5.8e-44 181.4 147 59.2
PGR119G0159 Punica granatum HOM05D007082 ORTHO05D008895 5.8e-44 181.4 155 56.1
THA.LOC104800748 Tarenaya hassleriana HOM05D007082 ORTHO05D008895 5.8e-44 181.4 150 59.3
MBI19_g34822_MAGBIO Magnolia biondii HOM05D007082 ORTHO05D008895 7.5e-44 181.0 157 57.3
Gorai.001G088200 Gossypium raimondii HOM05D007082 ORTHO05D008895 2.2e-43 179.5 150 53.3
CDE05G2411 Ceratophyllum demersum HOM05D007082 ORTHO05D008895 2.9e-43 179.1 152 57.9
Psat6g025560 Pisum sativum HOM05D007082 ORTHO05D008895 3.7e-43 178.7 157 52.2
Gohir.D07G082600 Gossypium hirsutum HOM05D007082 ORTHO05D008895 4.9e-43 178.3 150 53.3
Ah.11g050380 Amaranthus hybridus HOM05D007082 ORTHO05D008895 6.4e-43 177.9 163 55.2
EL10Ac5g10526 Beta vulgaris HOM05D007082 ORTHO05D008895 1.9e-42 176.4 158 54.4
Medtr1g033230 Medicago truncatula HOM05D007082 ORTHO05D008895 2.7e-41 172.6 158 51.9
Medtr5g020430 Medicago truncatula HOM05D007082 ORTHO05D008895 4.6e-41 171.8 158 51.9
Glyma.08G176000 Glycine max HOM05D007082 ORTHO05D008895 6.0e-41 171.4 159 53.5
Sc05g0001390 Simmondsia chinensis HOM05D007082 ORTHO05D008895 6.0e-41 171.4 150 52.0
HanXRQChr16g0516211 Helianthus annuus HOM05D007082 ORTHO05D008895 7.8e-41 171.0 139 59.0
Aa31LG5G6620 Aethionema arabicum HOM05D007082 ORTHO05D008895 1.7e-40 169.9 150 56.0
Zm00001eb394240 Zea mays HOM05D007082 ORTHO05D008895 5.0e-40 168.3 148 54.7
Psat6g050280 Pisum sativum HOM05D007082 ORTHO05D008895 1.1e-39 167.2 159 50.3
CARHR006820 Cardamine hirsuta HOM05D007082 ORTHO05D008895 1.5e-39 166.8 151 52.3
ECA247G0055 Erigeron canadensis HOM05D007082 ORTHO05D008895 1.5e-39 166.8 129 56.6
SEGI_21621 Sequoiadendron giganteum HOM05D007082 ORTHO05D008895 1.5e-39 166.8 150 52.0
unitig_0.g135 Utricularia gibba HOM05D004770 ORTHO05D005572 1.9e-39 166.4 149 51.7
SHI10976 Sapria himalayana HOM05D007082 ORTHO05D008895 2.5e-39 166.0 145 56.6
AL1G17250 Arabidopsis lyrata HOM05D007082 ORTHO05D008895 5.6e-39 164.9 151 51.7
Carub.0001s0641 Capsella rubella HOM05D007082 ORTHO05D008895 5.6e-39 164.9 156 53.2
VMungo1215G3041 Vigna mungo HOM05D007082 ORTHO05D008895 1.2e-38 163.7 160 52.5
Thhalv10008979m.g Eutrema salsugineum HOM05D007082 ORTHO05D008895 2.1e-38 162.9 151 51.7
A08p35770 Brassica napus HOM05D007082 ORTHO05D008895 1.4e-37 160.2 149 51.7
BraA08t35483Z Brassica rapa HOM05D007082 ORTHO05D008895 1.4e-37 160.2 149 51.7
Sp1g05880 Schrenkiella parvula HOM05D007082 ORTHO05D008895 2.3e-37 159.5 151 50.3
Os03g0366900 Oryza sativa ssp. japonica HOM05D007082 ORTHO05D008895 3.1e-37 159.1 159 50.3
AT1G07130 Arabidopsis thaliana HOM05D007082 ORTHO05D008895 5.2e-37 158.3 151 49.7
C08p02920 Brassica napus HOM05D007082 ORTHO05D008895 1.2e-36 157.1 149 49.7
BolC8t47089H Brassica oleracea HOM05D007082 ORTHO05D008895 1.2e-36 157.1 149 49.7
BolC8t47080H Brassica oleracea HOM05D007082 ORTHO05D008895 4.4e-36 155.2 149 49.7
SGA_v2.0_scaffold80G25747 Striga asiatica HOM05D004770 ORTHO05D005572 4.9e-35 151.8 162 50.0
Gohir.A07G077800 Gossypium hirsutum HOM05D007082 ORTHO05D008895 8.3e-35 151.0 152 48.0
Phvul.003G015400 Phaseolus vulgaris HOM05D007082 ORTHO05D008895 4.1e-34 148.7 153 51.0
C08p02850 Brassica napus HOM05D007082 ORTHO05D008895 1.6e-33 146.7 163 46.0
Pp3c1_6180 Physcomitrium patens HOM05D007082 ORTHO05D008895 7.8e-33 144.4 147 42.9
MD15G1065600 Malus domestica HOM05D007082 ORTHO05D008895 3.0e-32 142.5 122 61.5
Aqoxy5G02465 Aquilegia oxysepala HOM05D007082 ORTHO05D008895 6.6e-32 141.4 162 48.1
AUR62032313 Chenopodium quinoa HOM05D007082 ORTHO05D008895 8.6e-32 141.0 158 46.8
BcaB03g13405 Brassica carinata HOM05D007082 ORTHO05D008895 1.1e-31 140.6 150 44.7
Mapoly0041s0121 Marchantia polymorpha HOM05D007082 ORTHO05D008895 1.1e-31 140.6 147 44.9
Eucgr.L00806 Eucalyptus grandis HOM05D007082 ORTHO05D008895 2.5e-31 139.4 148 44.6
AUR62011993 Chenopodium quinoa HOM05D007082 ORTHO05D008895 7.3e-31 137.9 158 46.2
AagrBONN_evm.TU.Sc2ySwM_117.1416 Anthoceros agrestis HOM05D007082 ORTHO05D008895 8.1e-30 134.4 150 40.7
Lj3g0026065 Lotus japonicus HOM05D007082 ORTHO05D008895 8.1e-30 134.4 111 58.6
ATR0580G091 Amborella trichopoda HOM05D007082 ORTHO05D008895 1.4e-26 123.6 147 42.9
PGSC0003DMG400045025 Solanum tuberosum HOM05D007082 ORTHO05D008895 1.3e-19 100.5 114 51.8
Actinidia09115 Actinidia chinensis HOM05D007082 ORTHO05D008895 1.9e-18 96.7 67 59.7
Medtr5g020340 Medicago truncatula HOM05D000096 ORTHO05D008895 1.1e-15 87.4 127 38.6
Peaxi162Scf01115g00007 Petunia axillaris HOM05D007082 ORTHO05D008895 3.3e-15 85.9 59 71.2
SMO307G0023 Selaginella moellendorffii HOM05D007082 ORTHO05D008895 2.0e-12 76.6 131 36.6
MCO14G264 Micromonas commoda HOM05D007082 ORTHO05D008895 6.4e-11 71.6 116 30.2
BcaC02g08447 Brassica carinata HOM05D002728 ORTHO05D002874 7.4e-07 58.2 135 26.7
Sc05g0001360 Simmondsia chinensis HOM05D007082 ORTHO05D008895 7.4e-07 58.2 142 29.6
PRCOL_00001098 Prasinoderma coloniale HOM05D007082 ORTHO05D008895 1.3e-06 57.4 125 29.6


User provided reference genes

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