Gene: Sopen01g033930

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g033930
  • Transcript Identifier Sopen01g033930.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 91617765-91620699 : negative

Gene Family Information

  • ID HOM05D006280
  • #Genes/#Species 127/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g033930.1

Descriptions

  • Description Induced in response to ionizing radiation, shows basal expression in mitotically active cells and high expression in endoreduplicating cells. May be involved in DNA damage-induced growth arrest. Protein sequence contains a PEST destruction box. | gamma response gene 1 (GR1) | INVOLVED IN: meiotic DNA double-strand break processing, response to DNA damage stimulus, gamete generation, response to ionizing radiation | EXPRESSED IN: bud, cultured cell, leaf | EXPRESSED DURING: seedling growth | CONTAINS InterPro DOMAIN/s: DNA repair protein Sae2/CtIP
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
IEA
InterProDNA repair
GO:0000706
ISO
PLAZA Integrative Orthologymeiotic DNA double-strand break processing AT3G52115
GO:0007276
ISO
PLAZA Integrative Orthologygamete generation AT3G52115
GO:0006974
ISO
PLAZA Integrative Orthologycellular response to DNA damage stimulus AT3G52115
GO:0010212
ISO
PLAZA Integrative Orthologyresponse to ionizing radiation AT3G52115

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004519
IEA
InterProendonuclease activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013882 DNA endonuclease Ctp1, C-terminal
IPR033316 DNA endonuclease RBBP8-like
Mapman id Description
13.3.5.3.3 Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic double strand break processing.ssDNA endonuclease (COM1/SAE2)
14.3.7 DNA damage response.homologous recombination repair (HR).ssDNA endonuclease (COM1/SAE2)