Gene: Sopen01g023750

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g023750
  • Transcript Identifier Sopen01g023750.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 72276562-72279473 : negative

Gene Family Information

  • ID HOM05D000949
  • #Genes/#Species 633/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g023750.1

Descriptions

  • Description Encodes a poly(A) polymerase. Located in the cytoplasm. | poly(A) polymerase 3 (PAPS3) | FUNCTIONS IN: protein binding, polynucleotide adenylyltransferase activity | INVOLVED IN: RNA 3-end processing, RNA polyadenylation, transcription | LOCATED IN: cytoplasm | EXPRESSED IN: 7 plant structures | EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage | CONTAINS InterPro DOMAIN/s: Poly(A) polymerase , Poly(A) polymerase, central domain , Nucleotidyltransferase, class I, C-terminal-like , Poly(A) polymerase, RNA-binding domain | BEST Arabidopsis thaliana protein match is: nuclear poly(a) polymerase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043631
IEA
InterProRNA polyadenylation
GO:0031123
IEA
InterProRNA 3'-end processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004652
IEA
InterPropolynucleotide adenylyltransferase activity
GO:0003723
IEA
InterProRNA binding
GO:0016779
IEA
InterPronucleotidyltransferase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G06560

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT3G06560

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR043519 Nucleotidyltransferase superfamily
IPR007012 Poly(A) polymerase, central domain
IPR011068 Nucleotidyltransferase, class I-like, C-terminal
Mapman id Description
16.3.1.1.1 RNA processing.RNA 3'-end processing.mRNA polyadenylation.poly(A) RNA polymerase activity.poly(A) RNA polymerase