Gene: Solyc12g099510.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc12g099510.3
- Transcript Identifier Solyc12g099510.3.1
- Gene Type Coding gene
- Location SL4.0ch12 : 66159229-66172620 : negative
Gene Family Information
- ID HOM05D001406
- #Genes/#Species 446/100
- Phylogenetic origin
- ID ORTHO05D006300
- #Genes/#Species 144/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc12g099510.3.1
- uniprot A0A3Q7JEV9
- gene_id Solyc12g099510
Descriptions
- Description condensin-2 complex subunit D3 isoform X1 (AHRD V3.3 *** A0A2I4DSX7_9ROSI)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0007076 | IEA | InterPro | mitotic chromosome condensation | |
| GO:0071218 | IBA | GOA Database | cellular response to misfolded protein | |
| GO:0051085 | IBA | GOA Database | chaperone cofactor-dependent protein refolding | |
| GO:0030433 | IBA | GOA Database | ubiquitin-dependent ERAD pathway | |
| GO:0098653 | ISO | PLAZA Integrative Orthology | centromere clustering | AT4G15890 |
| GO:0010032 | ISO | PLAZA Integrative Orthology | meiotic chromosome condensation | AT4G15890 |
| GO:0009556 | ISO | PLAZA Integrative Orthology | microsporogenesis | AT4G15890 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030544 | IBA | GOA Database | Hsp70 protein binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G49060 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005789 | IBA | GOA Database | endoplasmic reticulum membrane | |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT3G57340 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR011989 | Armadillo-like helical |
| IPR032682 | Condensin complex subunit 1, C-terminal |
| IPR001623 | DnaJ domain |
| IPR015399 | Domain of unknown function DUF1977, DnaJ-like |
| IPR016024 | Armadillo-type fold |
| IPR036869 | Chaperone J-domain superfamily |
| IPR026971 | Condensin subunit 1/Condensin-2 complex subunit D3 |
| IPR011030 | Lipovitellin-phosvitin complex, superhelical domain |
| Mapman id | Description |
|---|---|
| 13.3.1.3.1 | Cell cycle organisation.mitosis and meiosis.chromatin condensation.condensin II complex.component CAP-D2B |