Gene: AT4G15890

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G15890
  • Transcript Identifier AT4G15890.1
  • Gene Type Coding gene
  • Location Chr4 : 9017453-9022745 : positive

Gene Family Information

  • ID HOM05D001406
  • #Genes/#Species 446/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G15890.1
  • uniprot O24610

Descriptions

  • Description binding protein
  • Computational description binding; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chromosome condensation protein, HCP-6-related (InterPro:IPR012371), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: binding (TAIR:AT3G57060.1); Has 443 Blast hits to 428 proteins in 158 species: Archae - 0; Bacteria - 0; Metazoa - 188; Fungi - 128; Plants - 61; Viruses - 3; Other Eukaryotes - 63 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051301
IEA
GOA Databasecell division
GO:0007076
IEA
GOA Databasemitotic chromosome condensation
GO:0007076
IBA
Gene Ontologymitotic chromosome condensation1
GO:0007076
IEA
InterPromitotic chromosome condensation
GO:0030261
IEA
GOA Databasechromosome condensation
GO:0007049
IEA
GOA Databasecell cycle
GO:0010032
IEA
GOA Databasemeiotic chromosome condensation
GO:0010032
IMP
IBA
Gene Ontologymeiotic chromosome condensation1 2
GO:0098653
IMP
Gene Ontologycentromere clustering3
GO:0009556
IMP
Gene Ontologymicrosporogenesis2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003682
IEA
GOA Databasechromatin binding
GO:0003682
IBA
Gene Ontologychromatin binding1
GO:0042393
IBA
Gene Ontologyhistone binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000796
IEA
Gene Ontologycondensin complex
GO:0000796
IEA
InterProcondensin complex
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus
GO:0000779
IEA
GOA Databasecondensed chromosome, centromeric region
GO:0000779
IBA
Gene Ontologycondensed chromosome, centromeric region1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR032682 Condensin complex subunit 1, C-terminal
IPR011989 Armadillo-like helical
IPR012371 Condensin-2 complex subunit D3
IPR026971 Condensin subunit 1/Condensin-2 complex subunit D3
IPR016024 Armadillo-type fold
Mapman id Description
13.3.1.3.1 Cell cycle organisation.mitosis and meiosis.chromatin condensation.condensin II complex.component CAP-D2B