Gene: AT4G15890
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G15890
- Transcript Identifier AT4G15890.1
- Gene Type Coding gene
- Location Chr4 : 9017453-9022745 : positive
Gene Family Information
- ID HOM05D001406
- #Genes/#Species 446/100
- Phylogenetic origin
- ID ORTHO05D006300
- #Genes/#Species 144/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT4G15890.1
- uniprot O24610
Descriptions
- Description binding protein
- Computational description binding; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chromosome condensation protein, HCP-6-related (InterPro:IPR012371), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: binding (TAIR:AT3G57060.1); Has 443 Blast hits to 428 proteins in 158 species: Archae - 0; Bacteria - 0; Metazoa - 188; Fungi - 128; Plants - 61; Viruses - 3; Other Eukaryotes - 63 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0051301 | IEA | GOA Database | cell division | |
GO:0007076 | IEA | GOA Database | mitotic chromosome condensation | |
GO:0007076 | IBA | Gene Ontology | mitotic chromosome condensation | 1 |
GO:0007076 | IEA | InterPro | mitotic chromosome condensation | |
GO:0030261 | IEA | GOA Database | chromosome condensation | |
GO:0007049 | IEA | GOA Database | cell cycle | |
GO:0010032 | IEA | GOA Database | meiotic chromosome condensation | |
GO:0010032 | IMP IBA | Gene Ontology | meiotic chromosome condensation | 1 2 |
GO:0098653 | IMP | Gene Ontology | centromere clustering | 3 |
GO:0009556 | IMP | Gene Ontology | microsporogenesis | 2 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003682 | IEA | GOA Database | chromatin binding | |
GO:0003682 | IBA | Gene Ontology | chromatin binding | 1 |
GO:0042393 | IBA | Gene Ontology | histone binding | 1 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0000796 | IEA | Gene Ontology | condensin complex | |
GO:0000796 | IEA | InterPro | condensin complex | |
GO:0005634 | IEA | GOA Database | nucleus | |
GO:0005634 | ISM | Gene Ontology | nucleus | |
GO:0000779 | IEA | GOA Database | condensed chromosome, centromeric region | |
GO:0000779 | IBA | Gene Ontology | condensed chromosome, centromeric region | 1 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
13.3.1.3.1 | Cell cycle organisation.mitosis and meiosis.chromatin condensation.condensin II complex.component CAP-D2B |