Gene: Solyc12g056100.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc12g056100.3
  • Transcript Identifier Solyc12g056100.3.1
  • Gene Type Coding gene
  • Location SL4.0ch12 : 61662174-61666474 : negative

Gene Family Information

  • ID HOM05D000050
  • #Genes/#Species 4474/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc12g056100.3.1
  • uniprot A0A3Q7JWU4
  • gene_id Solyc12g056100

Descriptions

  • Description Ubiquitin-conjugating enzyme (AHRD V3.3 *** A0A200PUP4_9MAGN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000209
IBA
GOA Databaseprotein polyubiquitination
GO:0006511
IBA
GOA Databaseubiquitin-dependent protein catabolic process
GO:0009960
ISO
PLAZA Integrative Orthologyendosperm development AT5G41700

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
GOA DatabaseATP binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0016740
IEA
GOA Databasetransferase activity
GO:0061631
IBA
GOA Databaseubiquitin conjugating enzyme activity
GO:0004842
ISO
PLAZA Integrative Orthologyubiquitin-protein transferase activity AT5G41700
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G41700

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G41700

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016135 Ubiquitin-conjugating enzyme/RWD-like
IPR000608 Ubiquitin-conjugating enzyme E2
Mapman id Description
19.2.2.5.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.MUB conjugation.conjugation E2 protein