Gene: AT5G41700
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G41700
- Transcript Identifier AT5G41700.5
- Gene Type Coding gene
- Location Chr5 : 16676072-16677223 : positive
Gene Family Information
- ID HOM05D000050
- #Genes/#Species 4474/100
- Phylogenetic origin
- ID ORTHO05D000380
- #Genes/#Species 1028/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT5G41700.5
- symbol UBC8
- Alias ATUBC8,ARABIDOPSIS THALIANA UBIQUITIN CONJUGATING ENZYME 8
- uniprot P35131
Descriptions
- Description ubiquitin conjugating enzyme 8
- Computational description ubiquitin conjugating enzyme 8 (UBC8); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 28 (TAIR:AT1G64230.2); Has 10659 Blast hits to 10620 proteins in 402 species: Archae - 0; Bacteria - 4; Metazoa - 4622; Fungi - 2335; Plants - 1937; Viruses - 26; Other Eukaryotes - 1735 (source: NCBI BLink).
- Computational description ubiquitin conjugating enzyme 8 (UBC8); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 28 (TAIR:AT1G64230.2).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006511 | IDA IBA TAS | Gene Ontology | ubiquitin-dependent protein catabolic process | 1 2 3 |
| GO:0016567 | IEA | GOA Database | protein ubiquitination | |
| GO:0000209 | IBA | Gene Ontology | protein polyubiquitination | 3 |
| GO:0009960 | IEP | Gene Ontology | endosperm development | 4 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0016740 | IEA | GOA Database | transferase activity | |
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0061631 | IEA | GOA Database | ubiquitin conjugating enzyme activity | |
| GO:0061631 | IBA | Gene Ontology | ubiquitin conjugating enzyme activity | 3 |
| GO:0004842 | IDA ISS | Gene Ontology | ubiquitin-protein transferase activity | 2 5 |
| GO:0005515 | IPI | Gene Ontology | protein binding | 6 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IDA ISM, IBA | Gene Ontology | nucleus | 3 7 |
| GO:0005737 | IDA | Gene Ontology | cytoplasm | 7 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 19.2.2.5.2 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.MUB conjugation.conjugation E2 protein |