Gene: Solyc12g049420.2

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc12g049420.2
  • Transcript Identifier Solyc12g049420.2.1
  • Gene Type Coding gene
  • Location SL4.0ch12 : 60668158-60671878 : negative

Gene Family Information

  • ID HOM05D002326
  • #Genes/#Species 292/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc12g049420.2.1
  • uniprot A0A3Q7J9T0
  • gene_id Solyc12g049420

Descriptions

  • Description 25.3 kDa vesicle transport protein (AHRD V3.3 *** A0A2G3AXE7_CAPCH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016192
IEA
GOA Databasevesicle-mediated transport
GO:0016192
IEA
InterProvesicle-mediated transport
GO:0006890
IBA
IEA
GOA Databaseretrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0006890
IEA
InterProretrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0006888
IBA
IEA
GOA Databaseendoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006888
IEA
InterProendoplasmic reticulum to Golgi vesicle-mediated transport
GO:0048280
IBA
GOA Databasevesicle fusion with Golgi apparatus

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005484
IBA
IEA
GOA DatabaseSNAP receptor activity
GO:0005484
IEA
InterProSNAP receptor activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G11890
GO:0000139
IBA
GOA DatabaseGolgi membrane
GO:0012507
IBA
GOA DatabaseER to Golgi transport vesicle membrane
GO:0005789
IBA
IEA
GOA Databaseendoplasmic reticulum membrane
GO:0005793
IBA
GOA Databaseendoplasmic reticulum-Golgi intermediate compartment
GO:0031201
IBA
GOA DatabaseSNARE complex
GO:0005783
IEA
GOA Databaseendoplasmic reticulum
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016021
IEA
InterProintegral component of membrane
GO:0005794
IEA
GOA DatabaseGolgi apparatus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010908 Longin domain
IPR044565 Vesicle-trafficking protein Sec22
IPR011012 Longin-like domain superfamily
IPR001388 Synaptobrevin
Mapman id Description
22.3.5.1.5.3 Vesicle trafficking.post-Golgi trafficking.target membrane fusion.membrane fusion complexes.R-type SNARE longin components.SEC22-group component