Gene: AT1G11890

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G11890
  • Transcript Identifier AT1G11890.1
  • Gene Type Coding gene
  • Location Chr1 : 4011509-4012835 : positive

Gene Family Information

  • ID HOM05D002326
  • #Genes/#Species 292/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G11890.1
  • symbol SEC22
  • Alias ATSEC22,SECRETION 22
  • full_name SECRETION 22
  • uniprot Q94AU2

Descriptions

  • Description Synaptobrevin family protein
  • Computational description SECRETION 22 (SEC22); FUNCTIONS IN: transporter activity; INVOLVED IN: transport, vesicle-mediated transport; LOCATED IN: Golgi apparatus, endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908), Longin-like (InterPro:IPR011012), Synaptobrevin (InterPro:IPR001388); BEST Arabidopsis thaliana protein match is: SNARE-like superfamily protein (TAIR:AT5G52270.1); Has 1577 Blast hits to 1577 proteins in 232 species: Archae - 0; Bacteria - 0; Metazoa - 548; Fungi - 342; Plants - 449; Viruses - 0; Other Eukaryotes - 238 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006890
IEA
GOA Databaseretrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0006890
IBA
Gene Ontologyretrograde vesicle-mediated transport, Golgi to endoplasmic reticulum1
GO:0006890
IEA
InterProretrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0006888
IEA
GOA Databaseendoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006888
IBA
Gene Ontologyendoplasmic reticulum to Golgi vesicle-mediated transport1
GO:0006888
IEA
InterProendoplasmic reticulum to Golgi vesicle-mediated transport
GO:0016192
IEA
GOA Databasevesicle-mediated transport
GO:0016192
IEA
InterProvesicle-mediated transport
GO:0015031
IEA
GOA Databaseprotein transport
GO:0048280
IBA
Gene Ontologyvesicle fusion with Golgi apparatus1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005484
IEA
GOA DatabaseSNAP receptor activity
GO:0005484
IBA
Gene OntologySNAP receptor activity1
GO:0005484
IEA
InterProSNAP receptor activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
IDA
GOA Databaseplasma membrane
GO:0005886
HDA
Gene Ontologyplasma membrane2
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016021
IEA
InterProintegral component of membrane
GO:0005783
IEA
GOA Databaseendoplasmic reticulum
GO:0005783
IDA
Gene Ontologyendoplasmic reticulum3
GO:0016020
IEA
GOA Databasemembrane
GO:0005794
IEA
GOA DatabaseGolgi apparatus
GO:0005794
IDA
Gene OntologyGolgi apparatus3
GO:0005789
IEA
GOA Databaseendoplasmic reticulum membrane
GO:0005789
IBA
Gene Ontologyendoplasmic reticulum membrane1
GO:0000139
IEA
GOA DatabaseGolgi membrane
GO:0000139
IBA
Gene OntologyGolgi membrane1
GO:0012507
IBA
Gene OntologyER to Golgi transport vesicle membrane1
GO:0005793
IBA
Gene Ontologyendoplasmic reticulum-Golgi intermediate compartment1
GO:0031201
IBA
Gene OntologySNARE complex1
GO:0005576
HDA
Gene Ontologyextracellular region4

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010908 Longin domain
IPR001388 Synaptobrevin
IPR011012 Longin-like domain superfamily
IPR044565 Vesicle-trafficking protein Sec22
Mapman id Description
22.3.5.1.5.3 Vesicle trafficking.post-Golgi trafficking.target membrane fusion.membrane fusion complexes.R-type SNARE longin components.SEC22-group component