Gene: Solyc12g006830.2

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc12g006830.2
  • Transcript Identifier Solyc12g006830.2.1
  • Gene Type Coding gene
  • Location SL4.0ch12 : 1251897-1255176 : negative

Gene Family Information

  • ID HOM05D000221
  • #Genes/#Species 1858/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc12g006830.2.1
  • uniprot A0A3Q7J258
  • gene_id Solyc12g006830

Descriptions

  • Description Histone H2A (AHRD V3.3 *** A0A1U8E2F1_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT1G52740
GO:0010468
ISO
PLAZA Integrative Orthologyregulation of gene expression AT1G52740
GO:0009909
ISO
PLAZA Integrative Orthologyregulation of flower development AT1G52740
GO:0009266
ISO
PLAZA Integrative Orthologyresponse to temperature stimulus AT1G52740
GO:0044030
ISO
PLAZA Integrative Orthologyregulation of DNA methylation AT1G52740
GO:0006342
IBA
GOA Databasechromatin silencing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IBA
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G52740
GO:0046982
IEA
GOA Databaseprotein heterodimerization activity
GO:0046982
IEA
InterProprotein heterodimerization activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT1G52740
GO:0000786
IEA
GOA Databasenucleosome
GO:0000786
IEA
InterPronucleosome
GO:0005634
IEA
GOA Databasenucleus
GO:0005694
IEA
GOA Databasechromosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002119 Histone H2A
IPR007125 Histone H2A/H2B/H3
IPR032454 Histone H2A, C-terminal domain
IPR009072 Histone-fold
Mapman id Description
12.1.1.1 Chromatin organisation.chromatin structure.DNA wrapping.histone (H2A)