Gene: Solyc12g005180.2

General Information

Structural Information

Species Solanum lycopersicum
Gene Identifier Solyc12g005180.2
Transcript Identifier Solyc12g005180.2.1
Gene Type Coding gene
Location SL4.0ch12 : 137290-140969 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D006818
#Genes/#Species 118/94
Phylogenetic origin

ID ORTHO05D008674
#Genes/#Species 116/94
Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

tid Solyc12g005180.2.1
uniprot A0A3Q7J1C7
gene_id Solyc12g005180

Descriptions

Short descriptions
Ortholog descriptions

Description Chloroplast lipocalin (AHRD V3.3 *** Q38JB4_SOLTU)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006979	ISO	PLAZA Integrative Orthology	response to oxidative stress	AT3G47860
GO:0009408	ISO	PLAZA Integrative Orthology	response to heat	AT3G47860
GO:0009737	ISO	PLAZA Integrative Orthology	response to abscisic acid	AT3G47860
GO:0046322	ISO	PLAZA Integrative Orthology	negative regulation of fatty acid oxidation	AT3G47860
GO:1901562	ISO	PLAZA Integrative Orthology	response to paraquat	AT3G47860
GO:0009644	ISO	PLAZA Integrative Orthology	response to high light intensity	AT3G47860
GO:0010117	ISO	PLAZA Integrative Orthology	photoprotection	AT3G47860
GO:0010431	ISO	PLAZA Integrative Orthology	seed maturation	AT3G47860
GO:0009414	ISO	PLAZA Integrative Orthology	response to water deprivation	AT3G47860

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0036094	IEA	GOA Database	small molecule binding
GO:0036094	IEA	InterPro	small molecule binding

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009507	ISO	PLAZA Integrative Orthology	chloroplast	AT3G47860
GO:0031977	ISO	PLAZA Integrative Orthology	thylakoid lumen	AT3G47860
GO:0009535	ISO	PLAZA Integrative Orthology	chloroplast thylakoid membrane	AT3G47860

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR000566	Lipocalin/cytosolic fatty-acid binding domain
IPR012674	Calycin
IPR002345	Lipocalin

Mapman id	Description
1.1.1.5.3.2.1	Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.non-photochemical quenching (NPQ).qH-type antenna quenching.NPQ-regulatory lipocalin (LCNP)