Gene: Solyc11g068930.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc11g068930.3
  • Transcript Identifier Solyc11g068930.3.1
  • Gene Type Coding gene
  • Location SL4.0ch11 : 51548103-51552893 : negative

Gene Family Information

  • ID HOM05D005873
  • #Genes/#Species 133/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc11g068930.3.1
  • uniprot A0A3Q7IZS2
  • gene_id Solyc11g068930

Descriptions

  • Description Ubiquitin-like modifier-activating enzyme atg7 (AHRD V3.3 *** A0A2G3BAU2_CAPCH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006995
IBA
GOA Databasecellular response to nitrogen starvation
GO:0050832
ISO
PLAZA Integrative Orthologydefense response to fungus AT5G45900
GO:0010150
ISO
PLAZA Integrative Orthologyleaf senescence AT5G45900
GO:0000422
IBA
GOA Databaseautophagy of mitochondrion
GO:0000045
IBA
GOA Databaseautophagosome assembly
GO:0032446
IBA
GOA Databaseprotein modification by small protein conjugation
GO:0006501
IBA
GOA DatabaseC-terminal protein lipidation
GO:0044805
IBA
GOA Databaselate nucleophagy
GO:0034727
IBA
GOA Databasepiecemeal microautophagy of the nucleus
GO:0006914
IEA
GOA Databaseautophagy
GO:0015031
IEA
GOA Databaseprotein transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019778
IBA
GOA DatabaseAtg12 activating enzyme activity
GO:0019779
IBA
GOA DatabaseAtg8 activating enzyme activity
GO:0008641
IEA
GOA Databaseubiquitin-like modifier activating enzyme activity
GO:0008641
IEA
InterProubiquitin-like modifier activating enzyme activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G45900
GO:0005737
IBA
IEA
GOA Databasecytoplasm
GO:0005737
IEA
InterProcytoplasm
GO:0000407
IBA
IEA
GOA Databasephagophore assembly site

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR032197 Ubiquitin-like modifier-activating enzyme Atg7, N-terminal
IPR000594 THIF-type NAD/FAD binding fold
IPR042522 Ubiquitin-like modifier-activating enzyme Atg7, N-terminal, subdomain 1
IPR042523 Ubiquitin-like modifier-activating enzyme Atg7, N-terminal, subdomain 2
IPR006285 Ubiquitin-like modifier-activating enzyme Atg7
IPR035985 Ubiquitin-activating enzyme
Mapman id Description
19.3.3.2 Protein homeostasis.autophagy.phagophore expansion.ATG8/12-activating E1 protein (ATG7)