Gene: Solyc11g028020.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc11g028020.3
- Transcript Identifier Solyc11g028020.3.1
- Gene Type Coding gene
- Location SL4.0ch11 : 19041991-19050026 : negative
Gene Family Information
- ID HOM05D000042
- #Genes/#Species 4894/100
- Phylogenetic origin
- ID ORTHO05D000028
- #Genes/#Species 3637/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc11g028020.3.1
- uniprot Q8H280
- gene_id Solyc11g028020
Descriptions
- Description Tomato AGAMOUS like 11
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0048283 | ISO | PLAZA Integrative Orthology | indeterminate inflorescence morphogenesis | Os12g0207000 |
| GO:0048481 | ISO | PLAZA Integrative Orthology | plant ovule development | AT4G09960 |
| GO:0010214 | ISO | PLAZA Integrative Orthology | seed coat development | AT4G09960 |
| GO:1903338 | ISO | PLAZA Integrative Orthology | regulation of cell wall organization or biogenesis | AT4G09960 |
| GO:0048316 | ISO | PLAZA Integrative Orthology | seed development | AT4G09960 |
| GO:0010622 | ISO | PLAZA Integrative Orthology | specification of ovule identity | Os12g0207000 |
| GO:0080155 | ISO | PLAZA Integrative Orthology | regulation of double fertilization forming a zygote and endosperm | AT4G09960 |
| GO:0051302 | ISO | PLAZA Integrative Orthology | regulation of cell division | AT4G09960 |
| GO:0048440 | ISO | PLAZA Integrative Orthology | carpel development | AT4G09960 |
| GO:0080060 | ISO | PLAZA Integrative Orthology | integument development | AT4G09960 |
| GO:0006357 | IBA | GOA Database | regulation of transcription by RNA polymerase II | |
| GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0045944 | IEA | GOA Database | positive regulation of transcription by RNA polymerase II | |
| GO:0045944 | IEA | InterPro | positive regulation of transcription by RNA polymerase II |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000981 | IBA | GOA Database | DNA-binding transcription factor activity, RNA polymerase II-specific | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G09960 |
| GO:0000978 | IBA | GOA Database | RNA polymerase II cis-regulatory region sequence-specific DNA binding | |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0000977 | IEA | GOA Database | RNA polymerase II transcription regulatory region sequence-specific DNA binding | |
| GO:0000977 | IEA | InterPro | RNA polymerase II transcription regulatory region sequence-specific DNA binding | |
| GO:0003700 | IEA | GOA Database | DNA-binding transcription factor activity | |
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0046983 | IEA | GOA Database | protein dimerization activity | |
| GO:0046983 | IEA | InterPro | protein dimerization activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0090397 | ISO | PLAZA Integrative Orthology | stigma papilla | AT4G09960 |
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | IEA | InterPro | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.14 | RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL) |