Gene: Solyc11g013400.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc11g013400.3
- Transcript Identifier Solyc11g013400.3.1
- Gene Type Coding gene
- Location SL4.0ch11 : 6484772-6495072 : positive
Gene Family Information
- ID HOM05D006316
- #Genes/#Species 126/94
- Phylogenetic origin
- ID ORTHO05D008032
- #Genes/#Species 124/94
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Solyc11g013400.3.1
- uniprot A0A3Q7ITM3
- gene_id Solyc11g013400
Descriptions
- Description Chromatin structure-remodeling complex protein BSH (AHRD V3.3 *** A0A1U8GF00_CAPAN)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006338 | IEA | GOA Database | chromatin remodeling | |
| GO:0006338 | IEA | InterPro | chromatin remodeling | |
| GO:0006357 | IBA | GOA Database | regulation of transcription by RNA polymerase II |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003712 | IBA | GOA Database | transcription coregulator activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G17590 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000228 | IEA | GOA Database | nuclear chromosome | |
| GO:0000228 | IEA | InterPro | nuclear chromosome | |
| GO:0005634 | IBA IEA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR006939 | SNF5/SMARCB1/INI1 |
| Mapman id | Description |
|---|---|
| 12.4.1.1.5 | Chromatin organisation.nucleosome remodeling.SWI/SNF chromatin remodeling complexes.core modules.component BSH |