Gene: Solyc11g007800.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc11g007800.3
  • Transcript Identifier Solyc11g007800.3.1
  • Gene Type Coding gene
  • Location SL4.0ch11 : 2067021-2073285 : negative

Gene Family Information

  • ID HOM05D003758
  • #Genes/#Species 183/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc11g007800.3.1
  • uniprot A0A3Q7JI95
  • gene_id Solyc11g007800

Descriptions

  • Description Ribonucleases P/MRP protein subunit POP1 (AHRD V3.3 *** A0A1J3EE83_NOCCA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0001682
IEA
GOA DatabasetRNA 5'-leader removal
GO:0001682
IEA
InterProtRNA 5'-leader removal
GO:0090502
IBA
GOA DatabaseRNA phosphodiester bond hydrolysis, endonucleolytic
GO:0008033
IBA
GOA DatabasetRNA processing
GO:0006364
ISO
PLAZA Integrative OrthologyrRNA processing AT2G47300

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000172
IBA
IEA
GOA Databaseribonuclease MRP complex
GO:0000172
IEA
InterProribonuclease MRP complex
GO:0005655
IBA
IEA
GOA Databasenucleolar ribonuclease P complex
GO:0005655
IEA
InterPronucleolar ribonuclease P complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009723 Pop1, N-terminal
IPR039182 Ribonucleases P/MRP protein subunit Pop1
IPR012590 POPLD domain
Mapman id Description
16.6.3.1 RNA processing.ribonuclease activities.RNA-dependent RNase P complex.component POP1