Gene: Solyc11g006340.2
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc11g006340.2
- Transcript Identifier Solyc11g006340.2.1
- Gene Type Coding gene
- Location SL4.0ch11 : 1100422-1105850 : positive
Gene Family Information
- ID HOM05D003159
- #Genes/#Species 216/100
- Phylogenetic origin
- ID ORTHO05D003780
- #Genes/#Species 205/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Solyc11g006340.2.1
- uniprot A0A3Q7IPB8
- gene_id Solyc11g006340
Descriptions
- Description Phosphoribosylaminoimidazole carboxylase (AHRD V3.3 *** A0A2G2Y6X3_CAPAN)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006189 | IEA | GOA Database | 'de novo' IMP biosynthetic process | |
| GO:0006189 | IEA | InterPro | 'de novo' IMP biosynthetic process | |
| GO:0006164 | IEA | GOA Database | purine nucleotide biosynthetic process | |
| GO:0009555 | ISO | PLAZA Integrative Orthology | pollen development | AT2G37690 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004638 | IEA | GOA Database | phosphoribosylaminoimidazole carboxylase activity | |
| GO:0004638 | IEA | InterPro | phosphoribosylaminoimidazole carboxylase activity | |
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0043727 | IEA | GOA Database | 5-amino-4-imidazole carboxylate lyase activity | |
| GO:0016831 | IEA | GOA Database | carboxy-lyase activity | |
| GO:0016829 | IEA | GOA Database | lyase activity | |
| GO:0046872 | IEA | GOA Database | metal ion binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | IBA | GOA Database | chloroplast | |
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT2G37690 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR011054 | Rudiment single hybrid motif |
| IPR016185 | Pre-ATP-grasp domain superfamily |
| IPR000031 | PurE domain |
| IPR005875 | Phosphoribosylaminoimidazole carboxylase, ATPase subunit |
| IPR016301 | Phosphoribosylaminoimidazole carboxylase, fungi/plant |
| IPR040686 | Phosphoribosylaminoimidazole carboxylase, C-terminal domain |
| IPR003135 | ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type |
| IPR013815 | ATP-grasp fold, subdomain 1 |
| Mapman id | Description |
|---|---|
| 6.1.1.6 | Nucleotide metabolism.purines.ribonucleotide (RN) anabolism.aminoimidazole RN carboxylase |