Gene: Solyc11g005800.2

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc11g005800.2
  • Transcript Identifier Solyc11g005800.2.1
  • Gene Type Coding gene
  • Location SL4.0ch11 : 660975-666898 : negative

Gene Family Information

  • ID HOM05D005401
  • #Genes/#Species 141/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc11g005800.2.1
  • uniprot A0A3Q7IP96
  • gene_id Solyc11g005800

Descriptions

  • Description Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A2U1QNA9_ARTAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006335
IEA
GOA DatabaseDNA replication-dependent nucleosome assembly
GO:0006335
IEA
InterProDNA replication-dependent nucleosome assembly
GO:0006334
IBA
GOA Databasenucleosome assembly
GO:0031507
ISO
PLAZA Integrative Orthologyheterochromatin assembly AT5G64630
GO:0048366
ISO
PLAZA Integrative Orthologyleaf development AT5G64630
GO:0000724
ISO
PLAZA Integrative Orthologydouble-strand break repair via homologous recombination AT5G64630
GO:0006310
ISO
PLAZA Integrative OrthologyDNA recombination AT5G64630
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT5G64630
GO:0009933
ISO
PLAZA Integrative Orthologymeristem structural organization AT5G64630
GO:0010026
ISO
PLAZA Integrative Orthologytrichome differentiation AT5G64630
GO:0016049
ISO
PLAZA Integrative Orthologycell growth AT5G64630

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0033186
IBA
GOA DatabaseCAF-1 complex
GO:0005634
IBA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR001680 WD40 repeat
IPR036322 WD40-repeat-containing domain superfamily
IPR045145 Chromatin assembly factor 1 subunit Cac2/CHAF1B/FAS2
Mapman id Description
12.2.1.2 Chromatin organisation.histone chaperone activities.CAF1 histone chaperone complex.component CAF1b/FAS2