Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g005110.3 Solanum lycopersicum HOM05D006616 ORTHO05D008435 4.4e-268 927.5 524 100.0
Sopen11g001110 Solanum pennellii HOM05D006616 ORTHO05D008435 3.5e-265 917.9 524 99.0
CAN.G526.15 Capsicum annuum HOM05D006616 ORTHO05D008435 1.1e-229 800.0 555 82.3
Peaxi162Scf00066g00130 Petunia axillaris HOM05D006616 ORTHO05D008435 1.5e-199 699.9 537 76.2
Nitab4.5_0001168g0150 Nicotiana tabacum HOM05D006616 ORTHO05D008435 1.5e-167 593.6 540 63.3
Dinv27270 Davidia involucrata HOM05D006616 ORTHO05D008435 1.2e-135 487.6 474 64.1
Hma1.2p1_2178F.1_g316210 Hydrangea macrophylla HOM05D006616 ORTHO05D008435 1.6e-124 450.7 471 59.9
Rhsim11G0071400 Rhododendron simsii HOM05D006616 ORTHO05D008435 1.0e-123 448.0 503 57.7
Actinidia03423 Actinidia chinensis HOM05D006616 ORTHO05D008435 7.3e-122 441.8 463 60.3
CSS0027023 Camellia sinensis var. sinensis HOM05D006616 ORTHO05D008435 9.5e-122 441.4 457 60.4
Oeu038315.2 Olea europaea HOM05D006616 ORTHO05D008435 7.5e-119 431.8 559 54.0
CSS0040058 Camellia sinensis var. sinensis HOM05D006616 ORTHO05D008435 6.4e-118 428.7 527 54.1
SalBow2G2978 Salvia bowleyana HOM05D006616 ORTHO05D008435 1.1e-117 427.9 554 48.6
Atru.chr1.1509 Acer truncatum HOM05D006616 ORTHO05D008435 3.2e-117 426.4 465 58.1
SGA_v2.0_scaffold25G11136 Striga asiatica HOM05D006616 ORTHO05D008435 7.1e-117 425.2 455 60.0
Cc10_g12770 Coffea canephora HOM05D006616 ORTHO05D008435 2.7e-116 423.3 467 58.5
ECA246G4188 Erigeron canadensis HOM05D006616 ORTHO05D008435 3.5e-116 422.9 545 52.7
Prupe.7G020500 Prunus persica HOM05D006616 ORTHO05D008435 1.0e-115 421.4 581 49.7
GSVIVG01025818001 Vitis vinifera HOM05D006616 ORTHO05D008435 1.0e-115 421.4 474 58.0
CANSAT78G0100 Cannabis sativa HOM05D006616 ORTHO05D008435 1.3e-115 421.0 519 53.2
MSTRG.24176 Avicennia marina HOM05D006616 ORTHO05D008435 1.7e-115 420.6 563 50.3
Eucgr.A02183 Eucalyptus grandis HOM05D006616 ORTHO05D008435 1.7e-115 420.6 444 60.4
TAR622G0026 Trochodendron aralioides HOM05D006616 ORTHO05D008435 2.3e-115 420.2 496 55.2
Lj5g0015037 Lotus japonicus HOM05D006616 ORTHO05D008435 3.0e-115 419.9 552 52.5
arahy.Tifrunner.gnm1.ann1.958W0C Arachis hypogaea HOM05D006616 ORTHO05D008435 3.6e-113 412.9 460 57.6
arahy.Tifrunner.gnm1.ann1.QA0LD5 Arachis hypogaea HOM05D006616 ORTHO05D008435 1.1e-112 411.4 460 57.8
Cfa019948 Carpinus fangiana HOM05D006616 ORTHO05D008435 2.4e-112 410.2 483 55.7
MD00G1150000 Malus domestica HOM05D006616 ORTHO05D008435 5.2e-112 409.1 475 56.8
Lj7A350T24 Lonicera japonica HOM05D006616 ORTHO05D008435 6.8e-112 408.7 515 48.5
TWI74G0800 Tripterygium wilfordii HOM05D006616 ORTHO05D008435 8.9e-112 408.3 464 56.7
Potri.006G032200 Populus trichocarpa HOM05D006616 ORTHO05D008435 2.0e-111 407.1 463 55.3
Ca_02795_v3 Cicer arietinum L. HOM05D006616 ORTHO05D008435 2.2e-110 403.7 541 52.1
MBI16_g32949_MAGBIO Magnolia biondii HOM05D006616 ORTHO05D008435 2.9e-110 403.3 512 51.2
Sabra06G0021500 Salix brachista HOM05D006616 ORTHO05D008435 6.4e-110 402.1 449 57.0
HanXRQChr05g0149371 Helianthus annuus HOM05D006616 ORTHO05D008435 1.1e-109 401.4 561 50.1
Lalb_Chr21g0316821 Lupinus albus HOM05D006616 ORTHO05D008435 1.1e-109 401.4 452 58.0
Manes.09G002500 Manihot esculenta HOM05D006616 ORTHO05D008435 1.4e-109 401.0 468 55.8
CiPaw.10G044000 Carya illinoinensis HOM05D006616 ORTHO05D008435 1.9e-109 400.6 589 49.4
VMungo0720G0485 Vigna mungo HOM05D006616 ORTHO05D008435 1.9e-109 400.6 550 52.0
TPR.G13802 Trifolium pratense HOM05D006616 ORTHO05D008435 1.2e-108 397.9 476 55.5
Ah.13g077310 Amaranthus hybridus HOM05D006616 ORTHO05D008435 1.6e-108 397.5 456 56.6
Migut.N03264 Erythranthe guttata HOM05D006616 ORTHO05D008435 2.3e-107 393.7 552 50.5
RcHm_v2.0_Chr3g0494671 Rosa chinensis HOM05D006616 ORTHO05D008435 2.3e-107 393.7 458 56.1
Hund19065 Selenicereus undatus HOM05D006616 ORTHO05D008435 2.3e-107 393.7 458 55.2
Thecc.05G123900 Theobroma cacao HOM05D006616 ORTHO05D008435 1.1e-106 391.3 472 53.6
PGR042G1816 Punica granatum HOM05D006616 ORTHO05D008435 1.5e-106 391.0 488 54.7
Aqoxy3G00148 Aquilegia oxysepala HOM05D006616 ORTHO05D008435 2.5e-106 390.2 477 56.0
Phvul.007G243700 Phaseolus vulgaris HOM05D006616 ORTHO05D008435 2.5e-106 390.2 544 48.5
QL07p014063 Quercus lobata HOM05D006616 ORTHO05D008435 3.6e-105 386.3 501 51.7
Medtr1g051155 Medicago truncatula HOM05D006616 ORTHO05D008435 1.1e-104 384.8 453 57.6
ATR0326G030 Amborella trichopoda HOM05D006616 ORTHO05D008435 1.4e-104 384.4 524 50.8
Glyma.02G162000 Glycine max HOM05D006616 ORTHO05D008435 2.4e-104 383.6 546 51.3
CDE04G3611 Ceratophyllum demersum HOM05D006616 ORTHO05D008435 3.1e-104 383.3 464 54.5
AUR62018417 Chenopodium quinoa HOM05D006616 ORTHO05D008435 9.0e-104 381.7 478 53.8
Psat6g087360 Pisum sativum HOM05D006616 ORTHO05D008435 1.2e-103 381.3 474 55.9
AUR62021025 Chenopodium quinoa HOM05D006616 ORTHO05D008435 7.6e-103 378.6 476 54.2
Ciclev10011646m.g Citrus clementina HOM05D006616 ORTHO05D008435 9.9e-103 378.3 468 55.1
Duzib128G1745 Durio zibethinus HOM05D006616 ORTHO05D008435 1.7e-102 377.5 460 53.0
Nitab4.5_0003863g0030 Nicotiana tabacum HOM05D006616 ORTHO05D008435 2.2e-102 377.1 321 67.6
Nn3g18184 Nelumbo nucifera HOM05D006616 ORTHO05D008435 1.6e-100 370.9 517 50.7
THA.LOC104815412 Tarenaya hassleriana HOM05D006616 ORTHO05D008435 4.6e-100 369.4 460 55.4
Gohir.A11G305800 Gossypium hirsutum HOM05D006616 ORTHO05D008435 6.0e-100 369.0 452 54.0
Lsat_1_v5_gn_6_110180 Lactuca sativa HOM05D006616 ORTHO05D008435 6.0e-100 369.0 560 50.2
FAN26G1972 Fragaria x ananassa HOM05D006616 ORTHO05D008435 7.8e-100 368.6 458 55.7
Gorai.007G351400 Gossypium raimondii HOM05D006616 ORTHO05D008435 5.1e-99 365.9 456 53.1
Gohir.D11G321200 Gossypium hirsutum HOM05D006616 ORTHO05D008435 6.6e-99 365.5 451 53.4
FAN28G1824 Fragaria x ananassa HOM05D006616 ORTHO05D008435 2.5e-98 363.6 458 55.5
DCAR_014373 Daucus carota HOM05D006616 ORTHO05D008435 1.8e-96 357.5 486 51.6
PSO478G1375 Papaver somniferum HOM05D006616 ORTHO05D008435 4.0e-96 356.3 466 51.9
EL10Ac3g07308 Beta vulgaris HOM05D006616 ORTHO05D008435 5.3e-96 355.9 465 53.1
Os01g0916300 Oryza sativa ssp. japonica HOM05D006616 ORTHO05D008435 6.9e-96 355.5 530 49.4
Aa31LG3G1010 Aethionema arabicum HOM05D006616 ORTHO05D008435 2.6e-95 353.6 463 52.7
Zm00001eb364810 Zea mays HOM05D006616 ORTHO05D008435 5.8e-95 352.4 530 47.4
CsaV3_3G040470 Cucumis sativus L. HOM05D006616 ORTHO05D008435 1.3e-94 351.3 499 49.3
FAN19G2668 Fragaria x ananassa HOM05D006616 ORTHO05D008435 1.3e-94 351.3 469 53.1
AT2G41020 Arabidopsis thaliana HOM05D006616 ORTHO05D008435 4.2e-93 346.3 452 53.8
Sed0024074 Sechium edule HOM05D006616 ORTHO05D008435 1.2e-92 344.7 498 47.6
HPP92_023122 Vanilla planifolia HOM05D006616 ORTHO05D008435 4.6e-92 342.8 533 47.7
Thhalv10002504m.g Eutrema salsugineum HOM05D006616 ORTHO05D008435 2.3e-91 340.5 480 50.2
C04p68740 Brassica napus HOM05D006616 ORTHO05D008435 3.9e-91 339.7 450 51.3
Sp4g23340 Schrenkiella parvula HOM05D006616 ORTHO05D008435 6.7e-91 339.0 451 52.8
BcaC02g12875 Brassica carinata HOM05D006616 ORTHO05D008435 8.7e-91 338.6 450 51.1
AL4G39000 Arabidopsis lyrata HOM05D006616 ORTHO05D008435 1.5e-90 337.8 452 53.1
unitig_52.g17546 Utricularia gibba HOM05D006616 ORTHO05D008435 4.3e-90 336.3 470 52.3
BraA04t18591Z Brassica rapa HOM05D006616 ORTHO05D002641 1.1e-88 331.6 443 51.0
A04p31340 Brassica napus HOM05D006616 ORTHO05D002641 9.0e-88 328.6 445 50.8
Carub.0004s2335 Capsella rubella HOM05D006616 ORTHO05D008435 7.6e-87 325.5 459 52.1
BolC4t28379H Brassica oleracea HOM05D006616 ORTHO05D008435 9.9e-87 325.1 443 50.3
FvH4_1g29230 Fragaria vesca HOM05D006616 ORTHO05D008435 7.1e-85 318.9 459 52.1
CARHR136140 Cardamine hirsuta HOM05D006616 ORTHO05D008435 1.6e-84 317.8 419 53.5
PSO017G2359 Papaver somniferum HOM05D006616 ORTHO05D008435 5.3e-80 302.8 385 53.2
Nitab4.5_0003863g0020 Nicotiana tabacum HOM05D006616 ORTHO05D008435 5.8e-79 299.3 256 66.0
Mapoly0043s0041 Marchantia polymorpha HOM05D006616 ORTHO05D008435 1.2e-76 291.6 585 41.0
ClCG10G015990 Citrullus lanatus HOM05D006616 ORTHO05D008435 2.1e-76 290.8 477 45.7
Pp3c10_1890 Physcomitrium patens HOM05D006616 ORTHO05D008435 2.4e-72 277.3 537 42.8
Pp3c10_1896 Physcomitrium patens HOM05D006616 ORTHO05D008435 2.4e-72 277.3 537 42.8
Haze_20291 Corylus avellana HOM05D006616 ORTHO05D008435 4.5e-71 273.1 354 56.2
MELO3C009780.2 Cucumis melo HOM05D006616 ORTHO05D008435 8.5e-62 242.3 578 38.9
Hma1.2p1_2178F.1_g316200 Hydrangea macrophylla HOM05D006616 ORTHO05D008435 4.1e-48 196.8 257 48.2
Sc13g0000840 Simmondsia chinensis HOM05D006616 ORTHO05D008435 5.0e-46 189.9 213 51.2
Cpa.g.sc33.190 Carica papaya HOM05D006616 ORTHO05D008435 3.6e-44 183.7 204 50.0
SEGI_28853 Sequoiadendron giganteum HOM05D006616 ORTHO05D008435 8.8e-43 179.1 355 44.5
Actinidia25416 Actinidia chinensis HOM05D006616 ORTHO05D008435 1.6e-36 158.3 202 48.0
AagrBONN_evm.TU.Sc2ySwM_228.200 Anthoceros agrestis HOM05D006616 ORTHO05D008435 8.0e-36 156.0 260 38.8
SEGI_15760 Sequoiadendron giganteum HOM05D006616 ORTHO05D008435 2.0e-34 151.4 125 65.6
CBR_g8767 Chara braunii HOM05D006616 ORTHO05D008435 2.4e-32 144.4 396 37.1
FAN23G2418 Fragaria x ananassa HOM05D006616 ORTHO05D008435 8.6e-30 136.0 79 91.1
COL.COLO4_33517 Corchorus olitorius HOM05D006616 ORTHO05D008435 1.2e-28 132.1 160 48.8
SMO339G0010 Selaginella moellendorffii HOM05D006616 ORTHO05D008435 1.8e-27 128.3 79 79.7
vmacro00862 Vaccinium macrocarpon HOM05D006616 ORTHO05D008435 5.7e-26 123.2 110 63.6
Psat1g016240 Pisum sativum HOM05D006616 ORTHO05D008435 1.1e-24 119.0 151 51.7
Psat7g065560 Pisum sativum HOM05D006616 ORTHO05D008435 4.1e-24 117.1 160 49.4
vmacro00863 Vaccinium macrocarpon HOM05D006616 ORTHO05D008435 4.3e-21 107.1 82 65.9
SHI24850 Sapria himalayana HOM05D006616 ORTHO05D008435 1.7e-17 95.1 164 36.6
MCO09G511 Micromonas commoda HOM05D006616 ORTHO05D008435 7.0e-16 89.7 336 38.1
Actinidia29490 Actinidia chinensis HOM05D006616 ORTHO05D008435 1.2e-15 89.0 82 56.1
PSO478G1191 Papaver somniferum HOM05D006616 ORTHO05D008435 6.2e-12 76.6 170 40.6
MBI16_g47221_MAGBIO Magnolia biondii HOM05D006616 ORTHO05D008435 5.2e-11 73.6 161 36.0
BcaC02g07966 Brassica carinata HOM05D001681 ORTHO05D001589 1.3e-09 68.9 50 72.0
Cre12.g527600 Chlamydomonas reinhardtii HOM05D006616 ORTHO05D008435 1.7e-09 68.6 47 66.0
Migut.C01363 Erythranthe guttata HOM05D006616 ORTHO05D008435 1.4e-08 65.5 169 33.1


User provided reference genes

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